| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003913 |
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| Symbol | |
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| ID | 8557649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2549042 |
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| End bp | 2550370 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407011 |
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| Product | TolB protein precursor |
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| Protein accession | YP_003286538 |
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| Protein GI | 262394684 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.26371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGTAC TGTTTAGCAG TATGACAAAT GTGGCGAATG CCGCATTAGA GTTGGTCATT
ACCGATGGTA TTGATTCAGC ACGACCAATT GCTGTTGTTC CGTTTAAGTG GGAGGGCACT
CAAGCGCTTC CAACGGATAT TTCTGCTGTT ATTGCCTCGG ATTTGCAACG CAGTGGTAAG
TTCAGCCCCG TTCCAACGAG CAAGATGCCA CAAACTCCGT TCAGTGAATC AGAAGTCAAT
TTTGATGCCT GGACTAATTT AGGCGTAGAT GCTTTGCTGA CTGGCTCAAT CAAACAAAAT
GCTCAAGGTG ATTACGTTAT CAACTACCAA CTTGTTGATA TTGTGCGTGG CCAGCTAACG
GGCGGGAAAA GTAAAGCGCT TGGTAGCGAT GGCGAATTAG TACTGTCAAA AGATCATGTG
CTGTTCAATA AGGTCGCGAC CGTTCAAGGC CCTCGCATGC GTGAGTACGC TCACCGTATC
TCTGATTTGG TGTATGAGCA GTTAACGGGT GACCGTGGTG CCTTCATGAC CCGTATTGCA
TACGTGGTAG TGAATGATAA AGACCGTTTC CCTTACCAAC TTCGTGTGGC TGATTACGAT
GGCTACAACG AGCGCTTGGT TTTACGTTCT AAACAACCAT TAATGTCACC AGCATGGTCG
CCAGATGGTA AAAAGCTTGC GTATGTTAGC TTCCAAAATG GTCAAGCAGA AATCTTCATC
ATGAACATCT ACACCGGTGA GCGTGAGAAG ATTACTTCAT ACCCACGTCA TAATGGTGCC
CCAAGATTTT CGCCTGATGG CAACAAGTTA GCGATTGTTC TCTCTAAGAC AGGCTCGCTT
CATGTTTATA CGTTCGATCT TAACACTCGC AAGCTGACGC AAATTACGCG TGGCAGATCA
AATAATACTG AACCGTTCTG GCATCCAGAT GGAAAATCGT TGATTTTCAC ATCGGATAGG
GGTGGTAAAC CACAGATTTA TCAAGTAAAT TTGGGCAGCG GTTCTATTGA CCGTTTGACT
TGGCAAGGCA GCCAAAATTT GGGTGGCCAG ATTACTCCTG ATGGGCGATT CCTAGTAATG
GTGAACCGCA GTAACGCAGG ATTTAACTTG GCGAAACAAG ATTTGGAAAC TGGTGCTCTT
CAAGTCTTAA CTAAGACCTT GCTTGATGAG TCTCCTAGTA TTGCCCCAAA CGGTGGCATG
GTTGTGTATA GCTCGATTTA CAACAAGAAA AACGTACTAT CGATGGTGTC AATTGATGGT
CGATTCAAAG CTAGATTACC GGCAACAAAT GGGCGTGTTA GAGCGCCTGC ATGGTCACCG
TTTTTGTAG
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| Protein sequence | MFVLFSSMTN VANAALELVI TDGIDSARPI AVVPFKWEGT QALPTDISAV IASDLQRSGK
FSPVPTSKMP QTPFSESEVN FDAWTNLGVD ALLTGSIKQN AQGDYVINYQ LVDIVRGQLT
GGKSKALGSD GELVLSKDHV LFNKVATVQG PRMREYAHRI SDLVYEQLTG DRGAFMTRIA
YVVVNDKDRF PYQLRVADYD GYNERLVLRS KQPLMSPAWS PDGKKLAYVS FQNGQAEIFI
MNIYTGEREK ITSYPRHNGA PRFSPDGNKL AIVLSKTGSL HVYTFDLNTR KLTQITRGRS
NNTEPFWHPD GKSLIFTSDR GGKPQIYQVN LGSGSIDRLT WQGSQNLGGQ ITPDGRFLVM
VNRSNAGFNL AKQDLETGAL QVLTKTLLDE SPSIAPNGGM VVYSSIYNKK NVLSMVSIDG
RFKARLPATN GRVRAPAWSP FL
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