| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003740 |
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| Symbol | |
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| ID | 8557475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2357707 |
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| End bp | 2359044 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406837 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003286365 |
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| Protein GI | 262394511 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.440951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTGGA TCCATAAATT TATCTTTGCC CTCTCTATTT GCACTATTAG TTTGGTTGCG
CTTTATAGTG TTCTTGGCGA TACACGAAAG CTGACCATTA CACCAGAACA TTTCAATATC
TATGCGACTA AAGACGCCAG CGAAGGTGGC TTGAGTGAGG CTGATATTTT TTACGATAAG
CAAAGCCTAG TTCTCAGCTG TGACTTAAAG CAAAGCTCGT ATGCTTGGCC TTATTGCGGA
ATCTCTGTTT ATACCGATTC CACAACGCCA ACACAGGGGA TTGACCTTTC CAATTACCAT
ACGATTCGAT TGAAAGTGAG ATATGAAGAG GCGGGGGTGG GGCCCAATCC GAGCCATGAT
TTGCGTTTAT ATCTGCGCAA CTATAACCCT GAGTATTCCA AACCAGACGA CGAGTACACG
ATTAAATACA ATGGCATGCA GTTTTCTCCG TCCGGTTCAA ACGACATCAT CGAAATTCCG
ATTAAAAATC TACAGGTGAT GACGTGGTGG TTAGTAGACA ACAAAGTCGC GATTGAACAC
TCTGCACCTG AATTTTCAAA CATCACACGT ATTGATATCG CGACCGGATC TGGTGCGGCA
CTTGGCGAGC ACAAAATTGT GATTGATAAA ATTGAGTTTG AAGGCGCTTA CCTTGCACAA
GAAACGTTAC TGTATGCGCT CTTACTCTCT TGGATGGCGC TTGGACTGGC ATTTTCGCTG
CACGAATTAC GAAAAAATCG AGTCGCTTAT GAAAAAGCGA AAAAACGTCA TCGTCATTTA
GAGAAGGTGA ATGGTACGTT GCGAGCTCAA AACTATGAGT TTGCAGAGTT GGCGCATCGC
GATGCGTTGA CGGGAGCGAT GAACCGTCAC GCAGTTCAGC ACTGGCTTGA GCAGCAATCA
CGGCAAGTTC GCTGGGGGCA TAGTACATTC AGTATCCTTT ATATGGATTT GGATAAATTT
AAGAAGGTGA ATGACAAATT TGGGCACCAA ATGGGGGATG ACATATTGCG CGAATTTGTC
ATGGTGGTGG CAAGTTCCAT CTACCCAGAT GACCGACTTG TTCGTTGGGG GGGAGAAGAA
TTTGTTGTAT TTTGCCCTGA CACCAATATT GATCAAGCTG TGAAGAAGTC GGAAATGATT
CGCAAAAATG TGGAGAGTCA TTTGTGGGTA CACGGTGAAT CATTAACATG CAGCATTGGC
GTCGCCCAAA TGCAAAATGA ACGCGTCTCA GAAACCATGG CGAGAGCAGA TGAAGTGCTC
TATCAAGCGA AGCGCAATGG TCGTAACCGG GTCGAGGTTC ATTATGGTTT GCTTGCCTGC
GAAAAGAAGC AAGCCTAA
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| Protein sequence | MKWIHKFIFA LSICTISLVA LYSVLGDTRK LTITPEHFNI YATKDASEGG LSEADIFYDK
QSLVLSCDLK QSSYAWPYCG ISVYTDSTTP TQGIDLSNYH TIRLKVRYEE AGVGPNPSHD
LRLYLRNYNP EYSKPDDEYT IKYNGMQFSP SGSNDIIEIP IKNLQVMTWW LVDNKVAIEH
SAPEFSNITR IDIATGSGAA LGEHKIVIDK IEFEGAYLAQ ETLLYALLLS WMALGLAFSL
HELRKNRVAY EKAKKRHRHL EKVNGTLRAQ NYEFAELAHR DALTGAMNRH AVQHWLEQQS
RQVRWGHSTF SILYMDLDKF KKVNDKFGHQ MGDDILREFV MVVASSIYPD DRLVRWGGEE
FVVFCPDTNI DQAVKKSEMI RKNVESHLWV HGESLTCSIG VAQMQNERVS ETMARADEVL
YQAKRNGRNR VEVHYGLLAC EKKQA
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