Gene VEA_003738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003738 
Symbol 
ID8557473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp2355300 
End bp2355974 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID646406835 
ProductSanA protein 
Protein accessionYP_003286363 
Protein GI262394509 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.28642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTTTGT CGATCTCTGT ACTTAGTCTG CTTGTTTCTG TTATTGCCAT CGACCGGTGG 
GTGGTTTTAC AAGCCAAAGA AAGCATTTTC ACTGAATACG AACCAATACC TCAACATGAG 
GTTGCTGTGG TTCTCGGTAC CAGTAAATAC ATCGGTAAGA TCCTCAACAC TTACTACACT 
CATCGCATTA ATGCGGCGAT TGAGCTTTAC AACCAAGGCA AAGTAAAACA GTTTTTATTG 
AGTGGCGATA ACGCCCATCG CTCCTACAAC GAACCGTGGA CGATGAAACG CGACTTACTT 
AAAGCCGGCG TGCCTGAGGA AGTGATTCAC CTTGATTATG CTGGCTTTCG TACTCTAGAT 
TCGATTGTGA GGGCGAAAAA GATTTTTGCT TCGGAGCGCT TTCTGATTGT GACTCAGCGC 
TTTCATTGTG AGCGAGCGCT GTTTATTGCC GATGCTTACA ATATTGATGC GCAGTGTCTT 
GCGGTAGCAG GACCTACGAC AAACAAACAA AAAACATCAA TGCGTATTCG AGAGTTGCTC 
GCCCGTGTGA AAGCCTTTTT AGACCTCTAC ATTATTAATA CGCAGCCCAA GTTTCTTGGT 
CCTCAAGAGC CTATCGTTGC AGTAAAAGAG CCTGAAAAAA TCTCTAATGA GCCTCTGCAA 
GTTCCCGTCG AATAG
 
Protein sequence
MILSISVLSL LVSVIAIDRW VVLQAKESIF TEYEPIPQHE VAVVLGTSKY IGKILNTYYT 
HRINAAIELY NQGKVKQFLL SGDNAHRSYN EPWTMKRDLL KAGVPEEVIH LDYAGFRTLD 
SIVRAKKIFA SERFLIVTQR FHCERALFIA DAYNIDAQCL AVAGPTTNKQ KTSMRIRELL 
ARVKAFLDLY IINTQPKFLG PQEPIVAVKE PEKISNEPLQ VPVE