| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003673 |
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| Symbol | |
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| ID | 8557408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2281962 |
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| End bp | 2282867 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406770 |
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| Product | 4-hydroxyproline epimerase |
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| Protein accession | YP_003286298 |
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| Protein GI | 262394444 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.778363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AGCGCCAATA CTTTCTTGAG CATTATGATT GGATTCGCCA GGCACTCATG
TTTGAGCCTC GCGGCCACTC AATGATGTCG GGGTCAGTTG TCTTGCCTCC TTGCAGTGAT
AACGCAGACG CTTCTATTCT GTTTATTGAA ACCAGTGGCT GCTTACCAAT GTGTGGCCAC
GGCACCATTG GAACCGTCAC CACCGCTATC GAGAATCGCC TTATCACTCC CAAAAAAGAA
GGTCGTTTGA TACTTGATGT CCCAGCAGGA CAAATCGAAG TGCACTACCA AACAAAAGGT
GACAAGGTCA CGTCGGTAAA GATATTTAAC GTACCGGCTT ACCTTGCCCA CCAAGACGTA
ACCGTGGACA TAGAGGGCTT AGGTGAGCTC ACTGTCGATG TTGCTTATGG CGGAAACTAT
TACGTAATCG TCGATCCTCA AGAAAACTAC GCCGGACTTG AACACTACTC TCCAGATGAA
ATTTTGATGC TTTCACCAAA AGTTCGCGAA GCGGTATCTC GAGCGGTTGA ATGCGTACAT
CCAGAAGATC CGACAGTGTG CGGTGTTTCT CACGTGCTAT GGACCGGAGA GCCCACTCAA
GAAAACGCCA CCGCTCGAAA TGCTGTGTTT TACGGCGACA AAGCGTTGGA TCGCTCGCCA
TGTGGTACGG GCACTAGTGC GCGCATGGCG CAATGGCATG CAAGAGGCAA ACTCAATCAA
GGAGAAGACT TTGTTCACGA AAGTATCATC GGCAGCCTAT TTCAAGGACG TATAGAAGGC
ATCACCGAAG TGAATGGCAA AGCCGCTATT TTGCCAAGTA TTGAAGGATG GGCACAAGTA
TACGGTCACA ACACGATATG GGTAGACGAT GAAGACCCAT ATGCGTACGG ATTTGAAGTG
AAGTAA
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| Protein sequence | MSEKRQYFLE HYDWIRQALM FEPRGHSMMS GSVVLPPCSD NADASILFIE TSGCLPMCGH
GTIGTVTTAI ENRLITPKKE GRLILDVPAG QIEVHYQTKG DKVTSVKIFN VPAYLAHQDV
TVDIEGLGEL TVDVAYGGNY YVIVDPQENY AGLEHYSPDE ILMLSPKVRE AVSRAVECVH
PEDPTVCGVS HVLWTGEPTQ ENATARNAVF YGDKALDRSP CGTGTSARMA QWHARGKLNQ
GEDFVHESII GSLFQGRIEG ITEVNGKAAI LPSIEGWAQV YGHNTIWVDD EDPYAYGFEV
K
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