| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003582 |
|---|
| Symbol | |
|---|
| ID | 8557315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2181055 |
|---|
| End bp | 2182272 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646406677 |
|---|
| Product | HD-domain protein |
|---|
| Protein accession | YP_003286207 |
|---|
| Protein GI | 262394353 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTACG ATCCAAAAAA TTCAATCAAA ATTGCGCTCG CTGATGTCGG CGTTGGTATG
TTTGTTACCG CGATAGAGCA CAACAAGCGC GTAAATTTAG CCAATGCAGG GCGGATATCT
AGCCCAGAGG GCATTAAGAA GCTTACCGCG AGCGGCGTGA AGTATGTTTG GGTAGATCAA
ACATTATCTT CTCAGAAGTG TGTCTTTAAG CCTGTGGATG AATCCATTGT TGCCGTAGAA
GAGGAGCGAG AGCCCAAGTC CTCTGACTTT TCGAAGGTTC AACGCGCTTA TCGCTCGAGA
GATGTTCAAC ATAAACGAGC CAAAAAGCTA ATTGCGGAAG CAAAAGATCT GGCGCAGAAA
CTATTGAATC AAACTTTTGA AGGCAAAATC ATTGAAGTTG ATGAGGTAGA AGCTTGGGCC
GATGATGTCA TTGAAAGCGT TTTTATCGAC TCAGATGCGT TGCAATGTGT TTCTGCACTC
CGAAAAAAAG ACTCCTACTT GTTGGAACAC TCCGTCAATG TGGCTTGCCT TTTAGTATCA
TTTGGTAAGT ACTTGGGGTT AGATAAGCAG ACATTAAAGC AGCTCGCTAT TGGTGGCATC
ATTCATGATG TAGGTAAAAT TAAAGTTGAT GACAAGATTT TGCATAAACC AGCAAAGCTA
ACACCTGAAG AGTTTGAACA CATGAAGCTA CATCAAGTGT TCGCTGGTGA GATTATTCTC
CATGTAAAGG GCCTTAGTGA TGTGAGTCGC GATGTCTGTT TGATGCATCA TGAGAAGTTA
GATGGCAATG GCTACCCTAG AGGCTTGAAG GGCGATGAGA TTCCGATTCA CGGCCGCATG
AGTTGTATTG TTGATATTTA CGATGCATTG ACGGCCGATC GTTGCTACAA AAAAGGCATG
AGCTCAGCAG AAGCGTTTAA AATCTTGTTG AGTTTAACGC CATTTCATTT AGATGCAGAC
CTAGTCTACA AGTTCATTAA TTGCGTTGGG GTGTACCCAG TGGGCTCTAT TGTTGAGTTG
AGTGATGGGC GTGTTGGTAT TGTTTGGTCC TCAAATGACT CTCAAGCTTT AAAGCCAGAA
GTGAAGTGTT TTTACTCACG CAAATATCAA CGTTATATCG ATGTGGCGAT GGTCGATTTG
AAAAATAGCC TACACAAAAT AGAAAGAGCA GTCGCTCCGT CATCGTTAGA AATCGATCCC
AAGCCTTTTT ATGATTAA
|
|---|
| Protein sequence | MQYDPKNSIK IALADVGVGM FVTAIEHNKR VNLANAGRIS SPEGIKKLTA SGVKYVWVDQ
TLSSQKCVFK PVDESIVAVE EEREPKSSDF SKVQRAYRSR DVQHKRAKKL IAEAKDLAQK
LLNQTFEGKI IEVDEVEAWA DDVIESVFID SDALQCVSAL RKKDSYLLEH SVNVACLLVS
FGKYLGLDKQ TLKQLAIGGI IHDVGKIKVD DKILHKPAKL TPEEFEHMKL HQVFAGEIIL
HVKGLSDVSR DVCLMHHEKL DGNGYPRGLK GDEIPIHGRM SCIVDIYDAL TADRCYKKGM
SSAEAFKILL SLTPFHLDAD LVYKFINCVG VYPVGSIVEL SDGRVGIVWS SNDSQALKPE
VKCFYSRKYQ RYIDVAMVDL KNSLHKIERA VAPSSLEIDP KPFYD
|
|---|
| |