Gene VEA_003581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003581 
Symbol 
ID8557314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp2180239 
End bp2180862 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID646406676 
Productprobable homoserine/homoserine lactone efflux protein 
Protein accessionYP_003286206 
Protein GI262394352 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTG ATACATGGAT TTTTTACACC CTGGCCATTT TGGTGCTCAC TGCATCGCCT 
GGGCCAAGCT CATTGCTGTG TTTAAGTAAA GGTGTGAGTA GTGGGTTTCG TATTGCCCTC 
ATGACTGCGC TAGGCAGTTT ATCAGCGATC ACTATTATAC TAACGCTTTC TTTTACCGGG 
TTAGGGGTTG TGATTGCCTC ATCTGAGCTG GTCTTCAATA TCATCAAATG GTGTGGTGCC 
GCTTATTTAA TCTGGTTAGG CATTCAAGCG CTGCGCTCTT CTCAAACGGA TTTTGACAAA 
ACGGCAGCCG TCCAAAGCTC CTCGAATGGG ATCAGCGCGT TCACCAGTGG TTTTATTGTT 
GGCGCTAGTA ACCCGAAAGC GATTGTCTTT TTTACCGCTT TGTTTCCTCA GTTCATTGAT 
CCCTCTGCGA CTTTGCTGGC TCAATACGCG ATTTTTGCAT CTACATTTGT GGTGTTTGAG 
CTAAGTTGGC TAACATTTTA TGCATTATTA GGTGTAAAAG CTTCAGACTG GCTGTTTGTC 
GCTGGAAGAG CCAAGTTGTT CAATCGCCTG ACTGGCGGAG TATTTATTAG CGCGGGCGTC 
ATGTTGTCGA CGGCAAACCG ATGA
 
Protein sequence
MQIDTWIFYT LAILVLTASP GPSSLLCLSK GVSSGFRIAL MTALGSLSAI TIILTLSFTG 
LGVVIASSEL VFNIIKWCGA AYLIWLGIQA LRSSQTDFDK TAAVQSSSNG ISAFTSGFIV 
GASNPKAIVF FTALFPQFID PSATLLAQYA IFASTFVVFE LSWLTFYALL GVKASDWLFV 
AGRAKLFNRL TGGVFISAGV MLSTANR