Gene VEA_003568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003568 
Symbol 
ID8557301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2164487 
End bp2166463 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content47% 
IMG OID646406663 
Productferrichrome transport system permease protein FhuB 
Protein accessionYP_003286193 
Protein GI262394339 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4779] ABC-type enterobactin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA TGCCTTTAAG CCTTGTGGTG TTACTTTCGG CATTTACCTT TTCTATTGGT 
GCTTTCCAAT TGTATCAAGC AAGTTCATTC TCACTGGCTC TTAGCAGTTT ATGGAAACCT
AACTTTCAAT CTATCGATTC CGTCTTACTT CACTTTAGCT GGTGGCCTCG AGTCTTCACC
ACGATTATAT CTGGTGCTGG ATTAGCGGTT GCTGGGGTAT TGATGCAGCA AGTTCTGCGT
AACCCTCTCG CTTCACCCAC GACACTTGGT GTGGCGAGCG GTTCAAGTTT TGCTTTGATG
TTAGCTACGC TATTTGCACC TTGGATGTTG GATATTGCGC CTAATTTGGT TGCTCTCATC
GGCGGTGTGA TATCGATGGG GTTGGTGATA CTGTTGTCAT GGCGACGAGC GTTATCTCCA
ACGGTTGTCG TCGTTTCTGG GTTAGTGATA AACCTGTACT TTGCATCATT AAGTACGGTT
ATTCTGATGA TGAATACCGA AAAGCTGAAT GGATTAATGA TATGGGGAGC GGGCTCGCTT
GTTCAAAGCG GATGGGGAGA TTTCTCGTAT CTTGCACCTC GAATCGCACT TGCCACGGTT
ATCGCATTTG TGTTTGCAAA GCCGTTAAGT CTGTTAGAAC TCTCCGAGCA AGGTGCCAAG
AGTTTAGGTG TCTCGCTAGC CAAACTGCGC TTTGTCTGTA TTGGGCTTGC GGTACTAATC
ACTTCTTGGG TCGTTTCTGC AGTAGGAATT ATCGGTTTCA TCGGGTTAGC AGCGCCTGCG
ATTACTCGAT TGATAGGTAT CAATAAAATC CAGCATAAGC TTTGGGTATC GATGCTGATT
GGTGCCATGT TATTGACTTT AACCGATTTG GTTATTCAGC AACTGCCGGG GCTAATGGCG
AGTTTTATAC CAACGGGAGC AGCAACGGCT GCATTGGGCT CTCCGCTACT GTTATGGTTG
TTACCTCGCT TATCACAAAA GACGCAGGGC CATACTCAAA CAGTGTTAAC TCGACACCGT
CAACATGTTT ACAAGCTAAA CCCTAAAGCG ATCTCATTGG CGTTGATCGG CACGTTAATT
TCCGTTGTTC TTTTTGCCAC GGTTGCTGTG CAAAATGAAG GGTGGACAAA CTTATTTTCT
AGCCAAAATT GGATTTTTTT GGAATGGCGC GCACCTAGAT TATTTGCAGC AGCAATTGCG
GGGGCAATGT TGGCGATTGC TGGGACCATG ATTCAACGCC TAAGTGGAAA CCCAATGGCC
AGTCCTGAAG TGATCGGCAT CAGTTCAGGG ACAGCGATGG GATTGATCAT CGCGATGTTT
ACTGGGTTTG GTTCGTCAAT TTTCACTCTT TCTCTAGGCG GGCTCGTAGG CGCATTAGCG
ACGGTATTGG TCATTGTGCT GCTAAACCGT AAATCAGGTT TTCAGCCGGA GCGCATTTTG
TTGACTGGTA TTGCTATTAC CGCACTGATG AATGCAATAC AGAGCTTTAT TCTAGCCACT
GGTGACCCAA GAAGTTATCA AGCATTGGCT TGGTTGTCTG GGTCTACCTA CTATGTTTCG
GTTGAAACGT TACTCCCATT GTCTTTATCT GCGCTTGTCT TTATAGGGTT GAGTTTTCTC
TGCGTAAGAT GGCTAGATAT TCTTCCTGTT GGCGCCGCTT CCTCTAAAGC ACTTGGGATT
CGCGTTGATC GTTCGCGCGC GATACTGCTG CTTTTAGTTG CTTGTCTCAC GGTCAGTGCG
ACATTGGTTG TTGGTCCTAT TAGCTTTGTT GGGTTACTGG CTCCGCATTT AGCTCGCTTA
TTTGGCTTTA ACAAAGCGTC ACAACACATG TTATGCGCCG CGATATTGGG TTCCGGCGTG
ATGTTGTTGG CCGATTGGTT GGGACGACAA GTTCTTTACC CGCAAGAAAT ACCAACAGGG
CTGATGGCGT CTCTCATTGG CGGTTTGTAT CTGATGTGGG GATTACGCCG TTTATAG
 
Protein sequence
MKAMPLSLVV LLSAFTFSIG AFQLYQASSF SLALSSLWKP NFQSIDSVLL HFSWWPRVFT 
TIISGAGLAV AGVLMQQVLR NPLASPTTLG VASGSSFALM LATLFAPWML DIAPNLVALI
GGVISMGLVI LLSWRRALSP TVVVVSGLVI NLYFASLSTV ILMMNTEKLN GLMIWGAGSL
VQSGWGDFSY LAPRIALATV IAFVFAKPLS LLELSEQGAK SLGVSLAKLR FVCIGLAVLI
TSWVVSAVGI IGFIGLAAPA ITRLIGINKI QHKLWVSMLI GAMLLTLTDL VIQQLPGLMA
SFIPTGAATA ALGSPLLLWL LPRLSQKTQG HTQTVLTRHR QHVYKLNPKA ISLALIGTLI
SVVLFATVAV QNEGWTNLFS SQNWIFLEWR APRLFAAAIA GAMLAIAGTM IQRLSGNPMA
SPEVIGISSG TAMGLIIAMF TGFGSSIFTL SLGGLVGALA TVLVIVLLNR KSGFQPERIL
LTGIAITALM NAIQSFILAT GDPRSYQALA WLSGSTYYVS VETLLPLSLS ALVFIGLSFL
CVRWLDILPV GAASSKALGI RVDRSRAILL LLVACLTVSA TLVVGPISFV GLLAPHLARL
FGFNKASQHM LCAAILGSGV MLLADWLGRQ VLYPQEIPTG LMASLIGGLY LMWGLRRL