Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003533 |
Symbol | |
ID | 8557266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2118219 |
End bp | 2119730 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646406628 |
Product | putative LuxO repressor protein |
Protein accession | YP_003286158 |
Protein GI | 262394304 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTACTGG TAGAAGACTC TACTTCATTA GCCATACTTT ATAAGCAGTA TGTCAAAGAC GAACCTTATG ACATTTTTCA TGTCGAAACA GGTCGCGAAG CAATTCAATT TATTGAAAGA AGCAAACCTC AGCTCATCAT TCTCGATTTG AAACTGCCCG ATATGTCTGG TGAAGACGTG TTGGATTGGA TCAACCAGAA TGACATTCCT ACCTCCGTTA TTATTGCTAC AGCGCATGGC AGCGTAGACT TAGCCGTTAA CCTAATTCAA AAAGGCGCGG AAGATTTCTT AGAAAAACCT ATTAACGCTG ATCGCCTAAA AACTTCTGTT GCATTGCACC TCAAACGCGC CAAACTGGAA GATTTAGTAG AAAACATTCA GTCCAAGTTT GATCGCCATA ACTATCACGG ATTTATCGGT TCAAGTCTCC CAATGCAGGC GGTATATAAA ACCATTGATG CCGTTGCTCC AACATCTGCC AGTGTCTTTA TTGTGGGTGA AAGCGGCACA GGTAAAGAAG TCTGTGCTGA AGCCGTGCAC CGTCAGAGCG ATCGTAAAGA CAAGCCTTTT ATTGCTATTA ACTGCGGGGC CATCCCCCGA GATTTAATGG AAAGTGAGAT TTTTGGCCAC GTTAAAGGCG CATTTACCGG AGCCACAACA GACCGAAAAG GTGCTGCGAC GCTGGCTCAC GGTGGAACGC TTTTTCTCGA TGAACTGTGT GAAATGGAAC TTGAGATGCA AAAGAAGTTG CTCCGTTTTC TTCAAACAGG AACCTACACA CCGCTTGGTG GCACTCGAGA GATGAAGGTG GATGTCCGAA TCATTTGTGC CACCAACCGA GATCCATTAA CAGAAGTGGA AGAAGGTCGT TTTCGTGAAG ATTTGTATTA CCGCGTACAC GTAATACCTA TCGATATGCC CCCCCTACGT GAGCGAGGAA GTGACATCGT CACGTTAGCC AAGCACTTTT TGACCACTTA TGCTAAACAG GACAAAAAGA AATTCTCAAC AATCGACAGC GAAGCTCAAC ATATCATCAA GCACTACGAA TGGCCGGGTA ATGTAAGGCA ATTGCAAAAC ATCATACGTA ACATTGTGGT GCTTAATAAT GACGAAAAAG TCACGCTGAA TCACCTACCC GCTCAACTGA CTAGAAAGTC TAAAACAGCG AGAACATCCA CCCCCGCACA TGTAACTCAA GAGCCAGCAA CCCCTCCAAC AATAACATCC CGACCAGTGT ATGTTGAGGA ACAATCGGCC TCCGCTAGAG AACCGTCAAT ACCGACACCG GAACCTAACA TACAATCCTC AGCGGCTGCC TCGCCGTACT TTAACTCTGA TGGAACCATT CGCCCTATGT GGCAAGTGGA GCGTGAGGCG ATTCAAAACG CAATCGCATA CTGTGATGGC AACGTACTCA ATGCCGCCGT AATGCTGGAG CTAAGCCCAT CTACGGTTTA CCGAAAAAAA CAAGCGTGGG AAGCGGATGA AATTAATCTC GAACAATCTT GA
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Protein sequence | MLLVEDSTSL AILYKQYVKD EPYDIFHVET GREAIQFIER SKPQLIILDL KLPDMSGEDV LDWINQNDIP TSVIIATAHG SVDLAVNLIQ KGAEDFLEKP INADRLKTSV ALHLKRAKLE DLVENIQSKF DRHNYHGFIG SSLPMQAVYK TIDAVAPTSA SVFIVGESGT GKEVCAEAVH RQSDRKDKPF IAINCGAIPR DLMESEIFGH VKGAFTGATT DRKGAATLAH GGTLFLDELC EMELEMQKKL LRFLQTGTYT PLGGTREMKV DVRIICATNR DPLTEVEEGR FREDLYYRVH VIPIDMPPLR ERGSDIVTLA KHFLTTYAKQ DKKKFSTIDS EAQHIIKHYE WPGNVRQLQN IIRNIVVLNN DEKVTLNHLP AQLTRKSKTA RTSTPAHVTQ EPATPPTITS RPVYVEEQSA SAREPSIPTP EPNIQSSAAA SPYFNSDGTI RPMWQVEREA IQNAIAYCDG NVLNAAVMLE LSPSTVYRKK QAWEADEINL EQS
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