| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003378 |
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| Symbol | |
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| ID | 8557111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1933204 |
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| End bp | 1934208 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406473 |
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| Product | type III secretion host injection and negative regulator protein (YopD) |
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| Protein accession | YP_003286003 |
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| Protein GI | 262394149 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGATA AAGTAGGCGG AACGGGACGC GGCGAACTGT ATGGTTTAGG CGATACCATT
AAAACCAACA AAGCAGAAAA AGCGCCGGAA ACAAAGCTTG AAGCAGGCGC CGTTAAAAGC
CAAAGTGAGC CAGGTGTTTC TGGTGCAGCA CGCTACCAGT TAGAGACGCC TAAAGCTCCT
ACAGTGAGTA ACCAAGCTCA AGTTGTTGCA AACCTAATGA GCGCTCTTGC ACCGACGGTG
AGCTCATTAA TGAGCACAAC GATGAAAGCG CTTAACGGTG AGGAGGTGAT CAAGTCACCA
TCAGATGCGG TATCACAATC GTTGACGCTA TTAACATTGT TGTATCAAGT ATCAAAGCTG
AGCCGTGAGC AGCAAGTGCT ACAACGTGAA ATTGCTGTTG AAGCAAACGT CGCGAGTTTA
GAAAGCCAAG CGGCAGAACT AAACAACTCG GCAAGTGCGA TGATCGCGAT GGCAGTCGTT
TCGGGTGTAT TAGCGGGTGC TACCGCAATT ATTGGTGCCC TTGGTTCTTT CAAAGCAGGG
AAAGAAATCA AGAATGAAAT GGCGAGCAAT AATGTACTGA AAACGCAAAA AGCTGGCTTC
GATCAAGCAG AAGAGTTATT GAATAACAAT AGCTTGTCTA AAACTCAGCA AGATCAGGTT
AAGCGTGCGC ACTCACTAGC GAAAGACAAT ATCGCAGACA CGACAGCGCA GCTGACAAGT
GGTGGCCGTA AGTTCGATAA GTTGATGAGC TCAAACCAAG CGAAGAACGC TATTCTTCAA
GCTTTGGGCC AGATGGCAAA CTCAGCATCG AATGTAGAGC AAACCAAAGC GCAAGCGCGC
AGCAAAGATG ATGAAGTACA AGCGACTCGC GCACAAGCAG CCAAACAGAA AGCCGATGAA
AACATTGGTT TCCAAGAAGG TTTATTGAAA GAGCTACGTG ACTTGTTCCG TTCTATCTCA
GATAGTCAGA ACCAAGCGTG GCGAGCGTCA GTCCCAACGG TGTAA
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| Protein sequence | MLDKVGGTGR GELYGLGDTI KTNKAEKAPE TKLEAGAVKS QSEPGVSGAA RYQLETPKAP
TVSNQAQVVA NLMSALAPTV SSLMSTTMKA LNGEEVIKSP SDAVSQSLTL LTLLYQVSKL
SREQQVLQRE IAVEANVASL ESQAAELNNS ASAMIAMAVV SGVLAGATAI IGALGSFKAG
KEIKNEMASN NVLKTQKAGF DQAEELLNNN SLSKTQQDQV KRAHSLAKDN IADTTAQLTS
GGRKFDKLMS SNQAKNAILQ ALGQMANSAS NVEQTKAQAR SKDDEVQATR AQAAKQKADE
NIGFQEGLLK ELRDLFRSIS DSQNQAWRAS VPTV
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