| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003340 |
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| Symbol | |
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| ID | 8557073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1902330 |
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| End bp | 1902578 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646406435 |
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| Product | type III secretion cytoplasmic protein (YscF) |
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| Protein accession | YP_003285965 |
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| Protein GI | 262394111 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02105] type III secretion apparatus needle protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.786644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATTTT ACGATGCTAG TAACAGTGTA AACCTTGATG ATGTTAAAGC TAAGTTAGAA
AAACAAGCGA AAGATGCCAA CACAGAAGTG ACGGCAGCCA TCAAGAACCT AGAAACAAAC
GCCGATGACC CATCTAAGCT GGCTGAACTT CAGCACGCGA TCAACCAATG GTCTGTTGTT
TACAACATCA ATGCGACCAC CACTCGTGCG ATTAAAGATG TGATGCAGTC GATTCTCCAA
AAGGTATAA
|
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| Protein sequence | MSFYDASNSV NLDDVKAKLE KQAKDANTEV TAAIKNLETN ADDPSKLAEL QHAINQWSVV
YNINATTTRA IKDVMQSILQ KV
|
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| |