Gene VEA_003307 details

Gene Information

• Locus tag: VEA_003307
• ID: 8557040
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1865554
• End bp: 1866180
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 646406402
• Product: putative threonine efflux protein
• Protein accession: YP_003285932
• Protein GI: 262394078
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTCAA ACTCACTATT ATTATTTGTT GTCGCTTGTC TCGCTATCAA CATGATTCCT 
GGACCTGATG TAATTTATAT TGTTTCCAAT ACAATGAAAG GTAAATTATC TGCTGGGCTG 
AAAGCGGCTC TGGGGCTTGG TGTTGGTTAC TTTTTTCATA CACTAGCGGC ATGTTTAGGT 
TTGTCAGCAA TAATTCTGAG TTCATCTTTG GCTTTTAGCG TTGTTAAATG GTTAGGGGCC 
GCTTACCTAG TTTATTTAGG TGTTCAGTCA TTACTGTCCA TGTGGCGTGG AGAAAATAAA 
ATCGTTGAAA ACAAAAATGT TGATAATAAT AAAAATGTGT TTGTTCAGGG GGTTATCGTC 
AGCGTCTTGA ATCCAAAAGT AGCGCTATTC TTTCTCTCGT TTCTGCCTCA ATTTATTGAT 
ACGTCTGCAA GCTCAACATC AATGCAATTA TTAGTACTTG GCTTGCTGTT CAGCGTACTT 
GCGACGACAT GTAACGTTTT GTACGCCTCT GTGGGTAATT GGGTATTTAG TCGTCCACAC 
TCTCAGCGTT ATTCAAGAAC TCTTGAAGGT GTTTCAGGTA TTCTACTTAT CAGTCTAGCG 
AGTAAAGTGG CATTTAGTGA TCGTTAG 

 

Protein sequence

MDSNSLLLFV VACLAINMIP GPDVIYIVSN TMKGKLSAGL KAALGLGVGY FFHTLAACLG 
LSAIILSSSL AFSVVKWLGA AYLVYLGVQS LLSMWRGENK IVENKNVDNN KNVFVQGVIV 
SVLNPKVALF FLSFLPQFID TSASSTSMQL LVLGLLFSVL ATTCNVLYAS VGNWVFSRPH 
SQRYSRTLEG VSGILLISLA SKVAFSDR