Gene VEA_003302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003302 
Symbol 
ID8557035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1862614 
End bp1863255 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content41% 
IMG OID646406397 
Productalanyl-tRNA synthetase domain protein 
Protein accessionYP_003285927 
Protein GI262394073 
COG category[R] General function prediction only 
COG ID[COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AATTATTTTG GGTTAATCCC TACCAAACAG AACTTAACTC AAGAGTGACC 
AATGTAGACG GAAATAAAGT TGAATTGGAC CAGACTATCT TCTTTGCGGA GTCTGGAGGA 
CAAGAGAGTG ATAAAGGAAC GATTAATGGT ATTCCGGTTT TGATTGCTCA AAAGTTAGGT 
GTTCGACTTA TTTACACATT GGAATCCTCT CCAAATTTTA CTCTTGGTGA CGCTGTAACT 
ACGTGTATTG ATTGGAAGCG TAGATACGCC TTAATGAAGC TACACTTTGC TGCCGAAGTG 
GTGCTCGAGA TGTTTTATCA GCGTCGAGAA GGCATTGTTA AGATAGGCGC GCATATTTCT 
GAAAATAAGA GCCGCATAGA TTTCGAGTGG TCTGAAAGTA TTGGTCCGTT ATTGAAAGCA 
ATTGAAACTG ATGTGCAAGA TTTGATTAAC TCTGATTCAG TTATTATTAG TGACTTTTCC 
GATCAAGAGA GTGAAAGAAG GTATTGGAGA GTGGATGGGT TTGCGCAAGT ACCTTGCGGT 
GGCACTCATT TAAAGCGCAC ATCAGAAGTC GGCCAAATTC AACTAAAACG CAAGAACATC 
GGTAAAGGCA AAGAAAGGGT TGAGATAACC TTATGCTCGT AA
 
Protein sequence
MSEKLFWVNP YQTELNSRVT NVDGNKVELD QTIFFAESGG QESDKGTING IPVLIAQKLG 
VRLIYTLESS PNFTLGDAVT TCIDWKRRYA LMKLHFAAEV VLEMFYQRRE GIVKIGAHIS 
ENKSRIDFEW SESIGPLLKA IETDVQDLIN SDSVIISDFS DQESERRYWR VDGFAQVPCG 
GTHLKRTSEV GQIQLKRKNI GKGKERVEIT LCS