| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003010 |
|---|
| Symbol | |
|---|
| ID | 8556740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1556787 |
|---|
| End bp | 1557938 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646406103 |
|---|
| Product | predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| Protein accession | YP_003285637 |
|---|
| Protein GI | 262393783 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4667] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.12929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACGTA ACAGCGGTAT AATCACAGAA AGCCACACTG AGCTTGATGT CAAAGTTTAT
GAGCATTTCA GGCACGGAAA AACTGCTTTA GTCACGCAAG GTGGAGGGCA GAGAGGGATT
TTTACCGCTG GCGTATTAGA CGCATTTTTA CTTTCCAACT TTGATCCTTT CGATGAATTC
TACGGTACCT CTGCTGGGGC ACTCAATTTA TGCTCTTACT TATGTCGTCA ACACGGTATG
GGCAAAGCTT TTATTACCGA ACTGACAACG TCTCCTGAGT TTTTTAATCT GTTTCGTTAT
ATTCGAAAAC AGCAGTACTT GGGTTTAGAG TGGGCGTTAG AGCGGATTCA AGATTTCCCT
TACAAGCTTG ATCTTGATTT AGGCCGCAGT GCACTAGGAG GGCGAGGTGC GTTTGCAGCG
GTAACAAATG TAGAGACGCT ATCGGATCAA TATTTACCAA TCTTGGGTGA CACGTGGTTT
AACACCATGT TAGCAACATG CGCGATTCCT AAGTTGTACC ACGGACCTGT CGACGTTAAT
GGCAATAAGT TTGTTGATGG TGGTGTGTCG GCTTCTATCC CTGTTCAAGA AGCGTGGCGT
CAGAATGCTC GCAACATTAT TGTCATCCGA ACAGAACCGT TCTCGGAGAT TGAAGCGAGA
GCGCAAAGTG AAGTAGGGGA TGTGCCTGTC GAGTGGTATC GAGAGTCTAT TAATTCGGTG
CAGCAATCAT GGCAGCAAAA AGTGAATCGA TGGAAGTTGG ATTGGGCTTC GTTCTTCCAA
CAAAAAATTA ATGCCGCCCA TCAATCGAAG CTTGCCGGAA AAATGCTATT GAATGGAGGC
CGTTGGTTGT TCGGTGCTGA TAATTTGTAT CGTTTAAGCC ATTTAATCGG TGAGAATTTT
GACTCAGGTT TAGCCGACAT GCTGATGATT CACTATCAAA CATTTGAGCT CACTCAGGCC
TTTATATCTG CTCCACCTGA CGATACTTTC ATTTTACAAA TCGCGCCTAA AGAGGGGCTT
CGTTCTTCTT CTTTGTTAAG TGACCAAGAA TCACTAGAGC ATGATTATCA ACTCGGACTT
CAGGCGGGGT TTAATCTGGT TCAACTCTAT GACCAACTGA ATATTGAAAT TGATGGCAGA
GAGAGTGCAT AA
|
|---|
| Protein sequence | MIRNSGIITE SHTELDVKVY EHFRHGKTAL VTQGGGQRGI FTAGVLDAFL LSNFDPFDEF
YGTSAGALNL CSYLCRQHGM GKAFITELTT SPEFFNLFRY IRKQQYLGLE WALERIQDFP
YKLDLDLGRS ALGGRGAFAA VTNVETLSDQ YLPILGDTWF NTMLATCAIP KLYHGPVDVN
GNKFVDGGVS ASIPVQEAWR QNARNIIVIR TEPFSEIEAR AQSEVGDVPV EWYRESINSV
QQSWQQKVNR WKLDWASFFQ QKINAAHQSK LAGKMLLNGG RWLFGADNLY RLSHLIGENF
DSGLADMLMI HYQTFELTQA FISAPPDDTF ILQIAPKEGL RSSSLLSDQE SLEHDYQLGL
QAGFNLVQLY DQLNIEIDGR ESA
|
|---|
| |