Gene VEA_002983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002983 
Symbol 
ID8556713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1529024 
End bp1529665 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID646406076 
Producturidine kinase (C1) 
Protein accessionYP_003285610 
Protein GI262393756 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.163408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATA ATAATCAATG CGTCATCGTA GGTATTGCTG GCGCTTCTGC TTCTGGAAAA 
AGTCTGATCG CGAGCACTAT TTATAATGAG CTTCGCGCGA AAGTAGGCGA TCATCAAATC 
GGTGTCATCA CGGAAGATTG CTACTACAAC GACCAAAGCC ACCTAAGCAT GGAAGAGCGA 
GTAAAGACGA ACTACGATCA CCCGAGTGCG TTGGACCACG ACCTACTGTG TGAGCACCTT 
GAAAAATTGG TACGTGGTGA AGCAGTAGAA GTACCTGAGT ACAGCTACAC TGAACACACA 
AGAACAAGTA ACACGACCAC AATGACGCCT AAAAAGGTGA TCATTCTAGA AGGTATCCTT 
CTTCTTACTG ACCCTCGTCT TCGTGATTTG ATGCACGCGA CAGTATTTAT GGATACACCG 
TTAGATATTT GCTTGCTTCG TCGTGTTAAG CGTGACGTGG AAGAACGAGG CCGAACTATG 
GAATCTGTTC TCAAGCAGTA TCAACAAACA GTACGTCCGA TGTTCATGCA GTTTATCGAA 
CCTTCTAAGC AATATGCGGA CATTATTGTT CCTCGCGGTG GTAAAAACCG TATCGCAATC 
GATGTATTAA AAGCTCACAT TGCAAGACTT TTGAAAGCTT AA
 
Protein sequence
MSDNNQCVIV GIAGASASGK SLIASTIYNE LRAKVGDHQI GVITEDCYYN DQSHLSMEER 
VKTNYDHPSA LDHDLLCEHL EKLVRGEAVE VPEYSYTEHT RTSNTTTMTP KKVIILEGIL 
LLTDPRLRDL MHATVFMDTP LDICLLRRVK RDVEERGRTM ESVLKQYQQT VRPMFMQFIE 
PSKQYADIIV PRGGKNRIAI DVLKAHIARL LKA