| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002913 |
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| Symbol | |
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| ID | 8556641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1449261 |
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| End bp | 1451111 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406004 |
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| Product | protease IV |
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| Protein accession | YP_003285540 |
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| Protein GI | 262393686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000149898 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC TCTTCAAATT TATTGGTTTG ATATTTAAAG GGATATGGAA GAGCATCACC
TTTATCAGAC TCGCACTGGC AAACCTGATC TTCTTGCTGA TGATTGCCGT TTTCTACTTT
GCTTTTACTT ATACCGGAGA CGGTCAACCC GTCGTCGAAA AAGAGTCGGC ATTGGTGATG
AACCTTTCAG GTCCGATTGT CGAACAAAGA CGCTATGTAA ATCCAATGGA CTCTTTTGCT
GGTTCCCTTT TGGGCAATGA GTTACCGAAA GAAAACGTCC TTTTCGATAT CGTTGATACT
ATTCGCTACG CGAAAGACGA TCCTAAAGTG TCTGGATTAG TGCTAGCACT GCGAGACATG
CCAGAAACAA ATCTCACGAA ATTACGTTAC ATCGCGAAAG CGTTGAACGA ATTTAAAGCG
TCAGGTAAAC CCGTTTACGC CGTAGGTGAT TTTTACAACC AAAGCCAATA TTACTTGGCA
AGTTACGCTG ATAAAGTTTA CCTGGCACCT GATGGCGGCG TATTGATTAA AGGTTACAGT
GCCTATTCAA TGTACTACAA AACGTTATTG GAAAAGCTCG ATGTTTCTAC TCATGTTTTT
CGCGTAGGTA CTTATAAATC CGCTATCGAA CCTTTTATTC GTGATGACAT GTCCGATGCC
GCGAAAGAGT CTGCAACACG CTGGGTTACT CAGTTGTGGA GTGCTTTTGT TGATGACGTA
ACCACAAACA GAAATATTGA TGCGAAAGTG CTTAACCCAA CCATGGATGA GCTGATTGAC
GAAATGAAGT CAGTGGATGG TGATCTTGCT CAGCTCGCGG TTAAACTAGG CTTGGTTGAT
GAACTCGCGA CACGCCAAGA CATTCGCACT CTATTTGCAA AGCAGTTTGG TAGTGACGGC
AAAGACAGCT ACAACGCGAT TGGTTACTAC GACTACCTTG CAACGATTCG CCCTGATTAC
ACACTACCTC AGCACGATAT CGCCGTTGTT CTAGCCAGTG GCGCGATTAT GGATGGTCAA
CAACCTCGTG GTACTGTCGG AGGTGACACC GTCGCAAGCT TGTTGCGTCA AGCACGCAAT
GATGAAAAGG TGAAAGCGGT CGTGTTGCGA GTAGATAGCC CTGGGGGTAG TGCCTTTGCC
TCTGAAGTGA TTCGCAACGA AGTAGAAGCA CTGAAACAAG CAGGCAAGCC AGTTGTTGTA
TCCATGTCGA GTTTAGCCGC TTCTGGTGGT TATTGGATTT CAATGAGCGC AGACAAGATC
GTTGCTCAGC CAACAACACT GACGGGTTCC ATTGGTATTT TTAGTGTCAT CACCACGTTT
GAAAAAGGCT TTAGCAAGTT AGGCATTAAT ACTGATGGCG TTGGCACATC GCCGTTCTCT
GGTGACGGTA TTACCACTGG CCTTTCTGAC GGCGCGTCTC AAGTATTCCA ATTAGGTATC
GAGCACGGTT ATAAGCGCTT TATTTCTTTG GTTGGCGAGA ATCGCGATAT GTCTCTAGAG
GAAGTCGACA ACGTCGCTCA AGGTCGAGTT TGGACTGGAC AAGACGCCCT ATCCTTTGGT
CTTGTTGACC AAATGGGTGA CTTTGATGAT GCCGTAGAAC TAGCGGCGAA ACTGGCGAAT
GTGACTGATT ACGGCATTTA CTGGGTAGAA GAACCGCTTT CTCCTACTGA ACTATTTTTA
CAAGAGTTCA TGAAACAGGT GAAAGTCTCT CTAGGTATTG ATGCAACCAG CTTGCTACCA
AAAAGTCTTC AACCCGTAGC TCAACAGTTC GAACAAGACG CAAGCTTGCT ACAAAGCTTT
AACGATCCTA AAGGTCAATA CGCATTTTGT TTGAACTGCC AAGTGCAGTA G
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| Protein sequence | MKKLFKFIGL IFKGIWKSIT FIRLALANLI FLLMIAVFYF AFTYTGDGQP VVEKESALVM
NLSGPIVEQR RYVNPMDSFA GSLLGNELPK ENVLFDIVDT IRYAKDDPKV SGLVLALRDM
PETNLTKLRY IAKALNEFKA SGKPVYAVGD FYNQSQYYLA SYADKVYLAP DGGVLIKGYS
AYSMYYKTLL EKLDVSTHVF RVGTYKSAIE PFIRDDMSDA AKESATRWVT QLWSAFVDDV
TTNRNIDAKV LNPTMDELID EMKSVDGDLA QLAVKLGLVD ELATRQDIRT LFAKQFGSDG
KDSYNAIGYY DYLATIRPDY TLPQHDIAVV LASGAIMDGQ QPRGTVGGDT VASLLRQARN
DEKVKAVVLR VDSPGGSAFA SEVIRNEVEA LKQAGKPVVV SMSSLAASGG YWISMSADKI
VAQPTTLTGS IGIFSVITTF EKGFSKLGIN TDGVGTSPFS GDGITTGLSD GASQVFQLGI
EHGYKRFISL VGENRDMSLE EVDNVAQGRV WTGQDALSFG LVDQMGDFDD AVELAAKLAN
VTDYGIYWVE EPLSPTELFL QEFMKQVKVS LGIDATSLLP KSLQPVAQQF EQDASLLQSF
NDPKGQYAFC LNCQVQ
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