| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002815 |
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| Symbol | |
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| ID | 8556543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1343296 |
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| End bp | 1345038 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405906 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | YP_003285442 |
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| Protein GI | 262393588 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAGACA AGTCTACAGA TTTAACCGTC ACTGAAGGCG GCTCAGATGG TGCACTGGTA
GCAAGTTCCG ACGTAGATGT GGAGAGTCAA AATCCAGATC TAGAGGAGCG CAGTGCGTCA
AAATTTGATA TGGCAGTGGG TGACCTTGAT TTACTTCGTC AAGTTGTACT TGTGCTGTCA
ATCTCCATCT GTGTTGCATT GATCGTGATG CTGTTCTTTT GGGTCAAAGA GCCGGAGATG
CGCCCGCTTG GAGCGTATGA GACCGAAGAG TTGATCCCCG TTTTGGATTA TCTGGACCAG
CAAAAAATCA ATTACAAGCT TGATGGTAAT ACCATTTCTG TTGAATCGAG CGAATACAAC
TCGATCAAAC TTGGCATGGT TCGCTCGGGC GTAAACCAAG CCACAGAGGC GGGCGATGAT
ATTTTGCTGC AAGATATGGG CTTTGGCGTA TCACAACGTT TAGAGCAAGA GCGCCTTAAA
CTCAGTCGAG AACGTCAGTT GGCTCAAGCG ATTGAGGAAA TGAAGCAAGT TCGTAAAGCG
CGAGTCTTAT TGGCGCTACC AAAGCACAGT GTTTTTGTGC GTCATAACCA AGAAGCATCA
GCGTCCGTAT TTTTGACACT GTCGACTGGT ACGAACCTCA AACAGCAAGA AGTTGATTCT
ATCGTCGACA TGGTGGCGAG TGCCGTTCCG GGAATGAAAA CTTCCCGCAT TACCGTCACA
GATCAGCATG GTCGTTTGCT CAGTTCAGGC TCTCAAGACC CTGCTTCTGC TGCGCGACGC
AAAGAGCAAG AATTAGAGCG TAGCCAGGAA CAAGCGCTGC GTGAAAAAAT TGATTCAGTG
CTATTACCTA TTTTAGGTTA TGGCAACTAC ACGGCGCAGG TCGATATCCA AATGGATTTC
AGCGCGGTTG AACAAACTCG CAAACGCTTT GATCCCAATA CCCCTGCAAC CCGCAGTGAG
TACGCATTAG AAGATTACAA TAACGGCAAT ATGGTAGCGG GTATTCCGGG GGCGTTAAGT
AATCAGCCTC CAGCGGATGC CTCTATTCCG CAAGATGTGG CTCAGATGAA AGACGGTTCT
GTCATGGGAC AGGGTTCGGT GCGTAAAGAA TCCACGCGTA ACTTTGAGCT TGATACCACC
ATCAGCCATG AGCGTAAGCA GACGGGGACG GTTGCTCGTC AGACGGTTTC TGTTGCGATT
AAGGACCGTC GTCAGGTCAA CCCAGATACG GGAGAAGTGA CCTATACCCC GATGTCCGAA
TCGGAAATTA ATGCTATTCG CCAAGTCTTA ATTGGTACGG TCGGTTTTGA CCAAGGCCGT
GGTGATTTGT TGAATGTACT GAGTGTGAAG TTTGCAGAGC CTGAGGCTGA ACAGCTGGAA
GAACCACCAA TTTGGGAGCA CCCTAACTTC AGTGACTGGG TTCGTTGGTT CGCAAGTGCA
TTAGTGATCA TCGTTGTTGT GTTGGTTCTG GTTCGCCCAG CAATGAAGAA ATTGCTTAAC
CCTACCAGTG ATGACGAAGA CGAAATGTAC GGACCAGACG GCTTGCCGAT TGGTGCAGAT
GGTGAAACTA GCCTGATTGG CAGCGACATT GAAAGCAGCG AACTGTTTGA GTTTGGTTCA
AGTATTGATT TGCCAAACCT TCATAAAGAT GAAGATGTAT TGAAAGCGGT TCGCGCTCTG
GTTGCGAATG AACCTGAACT TGCTGCTCAA GTAGTGAAAA ACTGGATGAA TGACAATGGC
TAA
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| Protein sequence | MADKSTDLTV TEGGSDGALV ASSDVDVESQ NPDLEERSAS KFDMAVGDLD LLRQVVLVLS
ISICVALIVM LFFWVKEPEM RPLGAYETEE LIPVLDYLDQ QKINYKLDGN TISVESSEYN
SIKLGMVRSG VNQATEAGDD ILLQDMGFGV SQRLEQERLK LSRERQLAQA IEEMKQVRKA
RVLLALPKHS VFVRHNQEAS ASVFLTLSTG TNLKQQEVDS IVDMVASAVP GMKTSRITVT
DQHGRLLSSG SQDPASAARR KEQELERSQE QALREKIDSV LLPILGYGNY TAQVDIQMDF
SAVEQTRKRF DPNTPATRSE YALEDYNNGN MVAGIPGALS NQPPADASIP QDVAQMKDGS
VMGQGSVRKE STRNFELDTT ISHERKQTGT VARQTVSVAI KDRRQVNPDT GEVTYTPMSE
SEINAIRQVL IGTVGFDQGR GDLLNVLSVK FAEPEAEQLE EPPIWEHPNF SDWVRWFASA
LVIIVVVLVL VRPAMKKLLN PTSDDEDEMY GPDGLPIGAD GETSLIGSDI ESSELFEFGS
SIDLPNLHKD EDVLKAVRAL VANEPELAAQ VVKNWMNDNG
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