| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002594 |
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| Symbol | |
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| ID | 8556320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1097929 |
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| End bp | 1101033 |
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| Gene Length | 3105 bp |
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| Protein Length | 1034 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405683 |
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| Product | putative multidrug resistance protein |
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| Protein accession | YP_003285221 |
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| Protein GI | 262393367 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.018875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACACTC TGATTGATGC TGCGTTATTC CGCGCTCGCA CCATGCTGAC ATTATTGGTG
ATGATCTTAA TTGCCGGTGT CATTACTTAC GTCACAATCC CCAAGGAATC GAGCCCTGAT
ATTACCATTC CTATTATCTA CGTTTCTGTT GGGCATCAAG GCATTTCTCC CGTCGATGCC
GAGCGTTTAT TAGTTCGCCC AATAGAGCAA GAGTTGCGCT CTATTGAAGG CGTAAAAGAG
ATGACCTCTG TGGCATCAGA AGGTCATGCT TCGGTGACGC TGGAATTTAG TGTTGGAGTG
GATCTTGATA AAGCGATGGC AGATGTCCGA GACGCCGTTG ACCTTGCGAA GCCAAAATTA
CCAGAGGACA GTGATGAGCC AACGGTAAAT GAAGTCACGT TTGCATCTGA AGAGCCTGTT
TTGACTGTTG TTCTATATGG CACCGTACCA GAGCGGACCA TTGTACAGAT TGCCAGAACG
CTACGTGATC GTTTGGAGAG TTTCCGTCAG GTTCTTGAGG TTGAAATCGC AGGGGATCGC
GAAGACATCG TGGAAATAGT TGTCGATCCG CTATTGATGG AAAGCTACGG TCTCGATCAA
GCGGATATTT ATAATTTAAT CGCCTTGAAT AACCGAGTGG TTGCAGCGGG ATTTGTCGAT
ACTGGGTATG GACGCTTTTC GGTAAAAGTC CCATCGGTGT TTGATTCACT GAAAGATGTG
CTTGAACTGC CAATCAAAGT GAATGGCAAA GAGGTGATCA CCTTTGGCGA TGTGGCGACA
GTACGACGTG CATTTCGCGA CCCTGAAAGT TTTGCTCGTT TAGATGGTGA ATCTGCCATC
GTTTTGGACG TAAAAAAACG GGCAGGGGAA AACATCATTG AAACGGTCGA GCTGGTAAAA
GAAGTACTGG CTCAGGGACA ACAGCGAGCC GAGTGGCCCG ACAATTTGCA AGTCAAATAC
ACTTGGGATC AATCCGACGA TGTCAAATTG ATGCTCAGTG ATCTACAAAA CAATATCTTA
TCCGCAATTA TCCTCGTCGT GATCGTCATT ATTGCTATAT TGGGGGTTAG GACCGCGCTT
CTCGTAGGTA TTTCTATTCC GGGATCGTTC TTGACTGGGT TGTTGGTGTT ATCGGTATTT
GGGTTGACGG TCAATATCGT CGTACTGTTT GCCTTAATTA TGGCGGTGGG CATGTTGGTG
GATGGTGCCA TTGTGGTGAC AGAGTTTGCT GACAGGCGCA TGCAAGAAGG TACGCCACGT
AAAGAAGCCT ATCGAGATGC AGCAAAGCGG ATGGCATGGC CAATTACCGC ATCCACTGCA
ACCACATTGG CTGCGTTTGC TCCGTTACTT TTCTGGCCAG ACATCACAGG TGAGTTCATG
AAGTACTTAC CACTTACTTT AATTGCTACC TTGGCCGCTT CGCTGATGAT GGCTTTACTG
TTCGTTCCTG TCATCGGTGG GATCATTGGC AAGCCTCAAG TAGTCAATCA GAAAGCTCAG
CGAGAAATGG TTGAGCTGCA TAACGGCAAT TTTGAAAAAG CGACAGGCAT TACCAAGCTT
TATTACCAGA CTCTGTCGGT AGCGATTCGT CATCCATGGA AAGTCTTATT CAGCGCGATA
CTGCTAGCGG CAGGTGTCGG TTTTACCTAC AACAAAGCCG GCTTGGGCGC CGAGTTTTTC
CCTGAAGTGG ACCCCGCCTT TTTTACCGTT AAAGTTCGCT CTTATGGTGA CCTGTCTATT
CACGAAAAAG ATGTTGTTAT GCGCGAAATA GAGAAGGTGA TGCTCGGTCA TGACGAGTTT
GAAAGTGTCT ATACGCGTAC AGGCTCCAGT GATAATGGGG ATGAAATCGG ACAGATTCAG
ATAACACCTG TGGATTGGCA GTATCGACGC AAAGTGAAAA CCATTATTGA AGAGCTAAAA
GAGACCACAG ATCGCTTTTA TGGTGTTGAA CTTGAGTATA AATTCCCGGA CGCAGGACCG
CCTGTTGAGC ATGATCTCGT GATTGAAGTT TCATCGCGAA ACTTGAGTGT TAGTGCGTTA
GATGAAGCGG CCAAAAAAGT CCGACACTGG GCTGATGGTA ATCCTGCACT GACCAATTTG
AGTGATACCA CTAATAAGGA AGGGATTGAT TGGCAAATTG ATATCCAGCG AGATGACGCC
TCTCGCTTTG CAGCGGATGC GACCTTAGTC GGGAATACTG TTCAGTTTGT TACAAACGGT
TTGAAAATAG GCGATTATTT GCCCGATGAT GCGGATGAAG AAGTCGATAT TTTGGTACGC
TATCCACAAG ATAAGCGCGA TATTGGTCGA TTTGACCAAC TGAGAGTGAA AACGGCAGCT
GGTCTGGTAC CGATTACGAA TTTTGCTCAA ATCAAACCAG ATCATAAGCA AGACACCATT
CGTCGGGTCG ACGGTCATCG AGTTATCAAT ATTAAAGCGG ATATGGTGGA AGGTTACAAT
TTGGCTCTTG AGCTACCGAA GATTGCCGCT GGAATGGAAC AGCTCGACTT ACCGGAAGGC
ATTGAATATA AGATTCGGGG TCAAAATGAA GAGCAGGAAA ACTCATCAGC ATTCTTGCAA
AATGCTTTTA TTGTCGCGCT TGGTGTGATG GCTCTGATTT TAATTACGCA GTTTAATAGC
TTTTATCAAG CTTTCTTAAT CCTCAGTGCT GTGTTGTTTT CTACCGTTGG GGTCTTTGCT
GGATTGCTTA TTTTCCAAAA GCCATTTGGC ATCATCATGT CGGGAATAGG GGTGATTGCG
CTTGCAGGTA TTGTTGTGAA TAACAACATC GTATTAATCG ATACTTATAA TCAGATGCGT
AAACGTGGCT TAGAGAAATC TGAGGCGATC TTGCGCACAG GTGTGCAGCG TTTAAGGCCC
GTTTTACTCA CGACGGTGAC CACCATACTA GGCTTATTAC CAATGGTGCT AGAAATGAAC
ATCGACTTAG TTAACCAAAA AGTGGAATTT GGCGCGCCAA GCACTCAATG GTGGTCTCAA
CTTGCGACGG CTGTCGCGGG TGGGTTGGCG TTTGCGACTT TGTTAACGCT GGTTCTGACA
CCATGCTTGC TCATGCTCGG GAGAGAGCAT CACTCCGAAA AGTAA
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| Protein sequence | MYTLIDAALF RARTMLTLLV MILIAGVITY VTIPKESSPD ITIPIIYVSV GHQGISPVDA
ERLLVRPIEQ ELRSIEGVKE MTSVASEGHA SVTLEFSVGV DLDKAMADVR DAVDLAKPKL
PEDSDEPTVN EVTFASEEPV LTVVLYGTVP ERTIVQIART LRDRLESFRQ VLEVEIAGDR
EDIVEIVVDP LLMESYGLDQ ADIYNLIALN NRVVAAGFVD TGYGRFSVKV PSVFDSLKDV
LELPIKVNGK EVITFGDVAT VRRAFRDPES FARLDGESAI VLDVKKRAGE NIIETVELVK
EVLAQGQQRA EWPDNLQVKY TWDQSDDVKL MLSDLQNNIL SAIILVVIVI IAILGVRTAL
LVGISIPGSF LTGLLVLSVF GLTVNIVVLF ALIMAVGMLV DGAIVVTEFA DRRMQEGTPR
KEAYRDAAKR MAWPITASTA TTLAAFAPLL FWPDITGEFM KYLPLTLIAT LAASLMMALL
FVPVIGGIIG KPQVVNQKAQ REMVELHNGN FEKATGITKL YYQTLSVAIR HPWKVLFSAI
LLAAGVGFTY NKAGLGAEFF PEVDPAFFTV KVRSYGDLSI HEKDVVMREI EKVMLGHDEF
ESVYTRTGSS DNGDEIGQIQ ITPVDWQYRR KVKTIIEELK ETTDRFYGVE LEYKFPDAGP
PVEHDLVIEV SSRNLSVSAL DEAAKKVRHW ADGNPALTNL SDTTNKEGID WQIDIQRDDA
SRFAADATLV GNTVQFVTNG LKIGDYLPDD ADEEVDILVR YPQDKRDIGR FDQLRVKTAA
GLVPITNFAQ IKPDHKQDTI RRVDGHRVIN IKADMVEGYN LALELPKIAA GMEQLDLPEG
IEYKIRGQNE EQENSSAFLQ NAFIVALGVM ALILITQFNS FYQAFLILSA VLFSTVGVFA
GLLIFQKPFG IIMSGIGVIA LAGIVVNNNI VLIDTYNQMR KRGLEKSEAI LRTGVQRLRP
VLLTTVTTIL GLLPMVLEMN IDLVNQKVEF GAPSTQWWSQ LATAVAGGLA FATLLTLVLT
PCLLMLGREH HSEK
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