| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002429 |
|---|
| Symbol | |
|---|
| ID | 8556124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 901491 |
|---|
| End bp | 902591 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405487 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003285056 |
|---|
| Protein GI | 262393202 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0795] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000155201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTATTG TTAGATATTT GATCCGCGAA ACACTCAAGA GCCAATTTGC GATTTTTTTC
GTACTTTTTT TGGTGTTTGT AAGCCAGAAA TTCATAAGTG TTCTTGCTGA TGCTTCTGAT
GGGGATATTC CTGCTGGATT GATTTTCTCG ATTGTTGGTT TGAATATGCC AGCAATGGGT
CTATTAATGC TGCCTTTAAG TCTGTATATC GGCATATTGA TCACGTTTGG TCGCCTGTAT
GCAGAGAGCG AAATTGTCGT GATGAACGCG ACAGGTATTG GTAACAAATT CCTGGTACAA
GCGGCCTTGT ACTTAGCACT GATTACTTCT GCTGTGGCGG CTTTCAATGC ATTGTGGTTA
TCGCCGTGGT CTCAAGACCG TGTTGAGCAA CTTTATGAAC AAGTGGCGGC AGAAAACAGC
GTTGACTTGC TAAAGAAAGG GCAATTCCAA GGCACGCCAG ATGGTTCATC GGTTGTCTTC
ATTGATGACA TTAAAGACAA TACATTGAGC AACGTTTTTG TCGCGCAGAT GCGCCCGAGA
GATTCAGTAT TGCCGAGTGT GATGTTCTCG TCTTCTGGTG AAGTAAAAGA GCTGTCGGAC
GGCCGTCAGG TCATCACCAT GAAAGAAGGC ACGCGTTATG AAGGTGTGCC TACTCGCGTT
GAATATATGA TCACAAAATT CGATGAATAC GAAGGCGTTA TCGGCCAGCG TGAGGTCAAA
AAGAAAGGGC GAGATTGGGA AGCGTACCCA ACGGTCGATT TGATTGGACA CCCAGACCCA
GAAGCGCAAG CAGAGCTGCA ATGGCGCATT TCGTTATTTG TGTGTATTCC ACTCTTAACG
ATGTTGGTTA TTCCATTGTC GGCGGTGAAT CCGCGTCAGG GACGATTTGC CAAAATGGGG
CCCGCGATTC TTATTTATCT AGCGTATTTC CTGGCGATTA GTGCAACAAA ATCTGCATTA
GAAGATGGTG ACATTCCGGC GGCAATCGGC ATGTGGCCAA TTAATGCGAT GTTACTGATT
GTCGCAATCA TGGCCAATAT GATGGACAGC GTTGCTGCTC GACGAATAAA AGACAAATTC
CGTAAAAAGA GGCTCGCGTA A
|
|---|
| Protein sequence | MIIVRYLIRE TLKSQFAIFF VLFLVFVSQK FISVLADASD GDIPAGLIFS IVGLNMPAMG
LLMLPLSLYI GILITFGRLY AESEIVVMNA TGIGNKFLVQ AALYLALITS AVAAFNALWL
SPWSQDRVEQ LYEQVAAENS VDLLKKGQFQ GTPDGSSVVF IDDIKDNTLS NVFVAQMRPR
DSVLPSVMFS SSGEVKELSD GRQVITMKEG TRYEGVPTRV EYMITKFDEY EGVIGQREVK
KKGRDWEAYP TVDLIGHPDP EAQAELQWRI SLFVCIPLLT MLVIPLSAVN PRQGRFAKMG
PAILIYLAYF LAISATKSAL EDGDIPAAIG MWPINAMLLI VAIMANMMDS VAARRIKDKF
RKKRLA
|
|---|
| |