Gene VEA_002413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002413 
Symbol 
ID8556108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp885263 
End bp885583 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content45% 
IMG OID646405471 
Productputative anti-sigma B factor antagonist 
Protein accessionYP_003285040 
Protein GI262393186 
COG category[R] General function prediction only 
COG ID[COG3113] Predicted NTP binding protein (contains STAS domain) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAGA CTCCCGCTCA GTGGCAATTA GATCAAAACA TTCTTAAGCT AACAGGGGCA 
CTTGATAGAG ATACAGTGCC CTCATTGTGG GCGTATGCTC AGCAATGGCA ACCAGCTCAA
GCTGAGCTGG AATGCTCGTT AAAAGAGATA GAGCGCGTCG ACTCTGCAGG AATGGTGATG
TTAATCCACT TATTAGAGAA TGCAAAAAAG CAAAACTGTC ATATAATGCT CAGTTTCGTG
CCGGCGCAAC TGCGCACTTT GTTTCAACTG AGCAATGTTG AATCTTTAGT GGCCAAACAC
ATACAGAATT ATCAGGGGTA A
 
Protein sequence
MAQTPAQWQL DQNILKLTGA LDRDTVPSLW AYAQQWQPAQ AELECSLKEI ERVDSAGMVM 
LIHLLENAKK QNCHIMLSFV PAQLRTLFQL SNVESLVAKH IQNYQG