| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002370 |
|---|
| Symbol | |
|---|
| ID | 8556065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 839371 |
|---|
| End bp | 840465 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646405428 |
|---|
| Product | MSHA biogenesis protein MshN |
|---|
| Protein accession | YP_003284997 |
|---|
| Protein GI | 262393143 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGCCA TCAATAAAGC ATTATCAGAA CTCGCTGAAA AAACATCACC GTCAGAGCTT
ACTCGTGCGG ACATTCCCAA CGTTTCACGC AGTAAACCTT GGCTTTGGCT CGTTGCTGGT
TTCTCGTTAA GCCTTGCGGT GGGCGGCTGG GCGGTCTCTC GCGGTCCTAT CCCTTCAGGC
GAGCTTTCAT CTGCTCAAAC AGAAACCATG CCATTGTCGT CAGTGAATGC TTCGTCAATC
ACATCATCAG AGCGTACTCA TTCGCCAACG AGTAAAATGA CGCCCGAGAC AGCCCATGTG
GTTTACACGA AGCCAGTGAC ACAACCGGCT GCGCAACAGC TTCATATGCC TGAGACTGAT
AGGTTCACGC CAAGAGCGGA GGTAAATGCG GTCTCTGAAG ATGCAGTGCT ACTCGCGCAA
GTGGCAACGA TGCCAAGCGA TGAGCAATCT AATCACGTAA CCCGCACGAC AGCAGAAAAC
AGTTCAATGC GTATTGAGCA GGTTGAGCTG ACGCACCGCC AGTTATCTCT TAAAGCGGTT
AGCCGAGCGG AAAAAGCACT GGATGCTAAC GATATGCAAA CGGCGTTGTC GGCTTATGCT
GAGGCGTTAC GTTATGAGCC AATGAATGCA GACACGCGTC AAAAATTATC GGCGTTGTAC
TTTGGCAAAG GCGACACGCG TAAAGCGTAT GAGATTATCC AAGAAGGGAT CAACCTTGAC
ACGAACAACC AAGTACTTCG TTTGGCCTTG TCTAAGTTGT TAGTGAAAGC TAATCAACCT
GAAGCGGCGC TGAGTCCGCT TGTGCATTTG CCTCCAATAC CAAGTCGAGA TTACTTGGCG
ATGCGTGCGG CATTGGCACA AAAACACAAG CAGAATGATA TTGCGCTTGA GAGTTATCAA
CTCCTTACTC AACGTGAGCC GGAAAATGCG CGCTGGTGGC TAGGTTTAGC GATTCAACAA
GAGCGCGCGC TGACGTTTAC CGCCGCGATC AACTCTTACA ACCAAGCTCT GGGTAAAGTT
GGAATTTCGA ATCAATCGCA AGCGTTTATT CGTGACCGTT TGAGCATCTT GAAACAGCTG
GAGAATGCAC AATGA
|
|---|
| Protein sequence | MSAINKALSE LAEKTSPSEL TRADIPNVSR SKPWLWLVAG FSLSLAVGGW AVSRGPIPSG
ELSSAQTETM PLSSVNASSI TSSERTHSPT SKMTPETAHV VYTKPVTQPA AQQLHMPETD
RFTPRAEVNA VSEDAVLLAQ VATMPSDEQS NHVTRTTAEN SSMRIEQVEL THRQLSLKAV
SRAEKALDAN DMQTALSAYA EALRYEPMNA DTRQKLSALY FGKGDTRKAY EIIQEGINLD
TNNQVLRLAL SKLLVKANQP EAALSPLVHL PPIPSRDYLA MRAALAQKHK QNDIALESYQ
LLTQREPENA RWWLGLAIQQ ERALTFTAAI NSYNQALGKV GISNQSQAFI RDRLSILKQL
ENAQ
|
|---|
| |