Gene VEA_002172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002172 
Symbol 
ID8555835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp593704 
End bp594072 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content47% 
IMG OID646405199 
ProductLSU ribosomal protein L7/L12 (L23e) 
Protein accessionYP_003284800 
Protein GI262392946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0222] Ribosomal protein L7/L12 
TIGRFAM ID[TIGR00855] ribosomal protein L7/L12 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATTA CTAACGAGCA AATCCTAGAC GCAGTTGCAG AAATGTCTGT AATGCAAGTT 
GTTGAACTAA TCGAAGCAAT GGAAGAGAAA TTCGGTGTTT CTGCTGCTGC TGCTGTTGTA
GCTGGCGGCG CTGCTGGCGG CGAAGCTGCT GCTGAGCAAA CTGAATTCGA CGTAATCCTA
GAAGCTGCTG GCGGTAACAA AGTTGCTGTA ATCAAAGCAG TACGTGGCGC AACTGGCCTA
GGTCTTAAAG AAGCTAAAGC TCTTGTAGAC GGCGCTCCAG CACCTCTTAA AGAAGGTGTT
GAGAAAGCAG AAGCTGAAGC TCTTAAAGCT CAGCTAGAAG AAGCTGGTGC AACTGTTGCT
GTTAAGTAA
 
Protein sequence
MSITNEQILD AVAEMSVMQV VELIEAMEEK FGVSAAAAVV AGGAAGGEAA AEQTEFDVIL 
EAAGGNKVAV IKAVRGATGL GLKEAKALVD GAPAPLKEGV EKAEAEALKA QLEEAGATVA
VK