Gene VEA_002117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002117 
Symbol 
ID8555772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp539381 
End bp539986 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content48% 
IMG OID646405136 
Producthypothetical protein 
Protein accessionYP_003284745 
Protein GI262392891 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCAAC CGTGTCCAAA TTGTGGTTTT CAATTCAACT GTATGTGCTC ACTGGTGCCG 
AAACTTACCA GCGAGCACAA CATCTTGCTG TTGATGCATC CGAATGAACT GACGCGTGAT 
ACTAATACCG GCCAGCTACT AGAGCAGTGC CAACTCAATA TTGAGCGAGT AACCTGGGAC 
CGAAAACAAC CACCAGCAGA CTTGCTCGCT CGATTAGCTG ATCCGTCGCT GTATCCAGTG 
CTTCTATTCC CAAGTGAAGA AAGCGTCACA CTCGAACATG TGGCGCTCCA AAGCCAGCAA 
CAAGCCAAAA CTCCGCTGTT TATTATTTTG GACGCTACCT GGCAAGAGGC GCGCAAGATG 
ATCAACAAGA GCCGTTGGTT AGAAAGTATC CCTACTATGG CGCTGTCTAC ATCGGCAGAC 
TCGCAATATC AGCTGCGACG CAACCAACAA CAAGGTAACT TGTGCACGTT TGAAGTCGCC 
GCACATTTAC TCGGACAACT AGGCGAGCAA AATAACCAGC AAAAAATGCT CACATTCTTT 
GCTCACTACC TTGCACTATT TCAAGCCGAA AAAAGTGGAC ACGCTCTCAA GCAATCACCG 
AGCTAA
 
Protein sequence
MSQPCPNCGF QFNCMCSLVP KLTSEHNILL LMHPNELTRD TNTGQLLEQC QLNIERVTWD 
RKQPPADLLA RLADPSLYPV LLFPSEESVT LEHVALQSQQ QAKTPLFIIL DATWQEARKM 
INKSRWLESI PTMALSTSAD SQYQLRRNQQ QGNLCTFEVA AHLLGQLGEQ NNQQKMLTFF 
AHYLALFQAE KSGHALKQSP S