| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002033 |
|---|
| Symbol | |
|---|
| ID | 8555673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 440881 |
|---|
| End bp | 441621 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646405037 |
|---|
| Product | putative amino acid ABC transporter permease protein |
|---|
| Protein accession | YP_003284661 |
|---|
| Protein GI | 262392807 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCTTTC GAACTCTATG GCTGATTTCG CTGCTGTTGC TCACAGGTTG CTCAGATTAT
CAATGGGGCT GGTATGTACT CGATCCCTCT ACGGAGCAAG GACTCACCAA TCTGAAGTTT
TTAATCGCCG GATTTAGTGA CACCATCCAA GTATCACTCC TCAGTATGTT ATTTGCGATG
ACATTAGGTT TAATCATCGC CCTACCGGCT CTGTCGAACT CTCCCTACTT GAAGTGGATC
AACCGCATTT ATGTCGAGGT AGTCCGCTCA GTGCCTGTTT TAGTCTTACT ACTTTGGGTG
TATTACGGCA TGCCAACGCT GTTGGATGTC TCACTCAATC ACTTTTGGGC GGGTGTTATT
GCCCTGACCA TTGCTGAGAG TGCGTTTATG GCGGAGGTGT TTCGCGGCGG AATCCAAGCC
ATCAGTCGTG GCCAGCATGA AGCGGCTGAA TCTTTGGGCT TAAGCTATTG GCAAAAGATG
CACTTGGTAA TTCTTCCCCA AGCGTTTCGA CAAATTCTCC CACCATTGGG AAATCAATTT
GTGTATATCC TGAAGATGAG TTCTTTGGTT AGTGTGATTG GTTTGAGCGA TCTCACTCGC
CGTGCCAATG AGCTGGTGGT GAATGAGTAC TTACCCCTAG AGATTTATAC CTTCCTCGTT
TTGGAGTACT TGTTGCTCAT TCTATTCGTA TCCCAAGCTG TTCGTTGGCT CGAAAAACGC
ATCGCCATTC CCAGTTACTA A
|
|---|
| Protein sequence | MTFRTLWLIS LLLLTGCSDY QWGWYVLDPS TEQGLTNLKF LIAGFSDTIQ VSLLSMLFAM
TLGLIIALPA LSNSPYLKWI NRIYVEVVRS VPVLVLLLWV YYGMPTLLDV SLNHFWAGVI
ALTIAESAFM AEVFRGGIQA ISRGQHEAAE SLGLSYWQKM HLVILPQAFR QILPPLGNQF
VYILKMSSLV SVIGLSDLTR RANELVVNEY LPLEIYTFLV LEYLLLILFV SQAVRWLEKR
IAIPSY
|
|---|
| |