Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001957 |
Symbol | |
ID | 8555586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 352405 |
End bp | 353016 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646404950 |
Product | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase |
Protein accession | YP_003284585 |
Protein GI | 262392731 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAC TTGAACAACG ATTAAGAGAA ATCAAAATCG TCCCAGTTAT CGCAATCAAC GACGTAGCAC ACGCTCTGCC ACTGGCAAAA GTGTTGGTAG AAAACGGTTT ACCATGTGCT GAAGTAACAT TCCGCACCGA AGCGGCGGCG GAGTCTATTC GCATCATGCG TGAAGCGTAC CCAGAACTGT TGATTGGCGC GGGCACCGTT CTGACCACAG AACAAGTCGA CATCGCAATC GAAGCGGGCG TGGACTTTAT CGTTAGCCCA GGCTTCAACC CAACCACAGT GAAATACTGT CAGCAACGTG GCGTGACTAT CGTACCGGGT GTAAACAACC CAAGCTTGGT TGAGCAAGCG ATGGAAATGG GTCTGCGTAC GTTGAAGTTC TTCCCTGCTG AGCCATCAGG CGGCGTAAAC ATGCTGAAAG CACTCACGGC GGTTTACCCA GTTGAATTCA TGCCAACAGG TGGCGTAAGC CCATCCAACG TTGAAGATTA CCTAGCGCTG AAATCGGTTG TAGCTTGTGG CGGTACTTGG ATGGTGCCAA CCGCAATGAT GGACAACGGC GATTGGGAAG GCATTGCTGA ATTGGTTCGC GCAGTTAAAT AA
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Protein sequence | MTTLEQRLRE IKIVPVIAIN DVAHALPLAK VLVENGLPCA EVTFRTEAAA ESIRIMREAY PELLIGAGTV LTTEQVDIAI EAGVDFIVSP GFNPTTVKYC QQRGVTIVPG VNNPSLVEQA MEMGLRTLKF FPAEPSGGVN MLKALTAVYP VEFMPTGGVS PSNVEDYLAL KSVVACGGTW MVPTAMMDNG DWEGIAELVR AVK
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