Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001844 |
Symbol | |
ID | 8555473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 231456 |
End bp | 233162 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646404837 |
Product | hypothetical protein |
Protein accession | YP_003284472 |
Protein GI | 262392618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCAGAAA CCAATTCACA ACATTTTGCG CTAGTCGATG AGCTAAATAA GACGGTTACT AAAAGTCTAG TAACGACGTT CGGTTTGGAT TTTTTACTTT TTGAAGACAA AAAAGGTGGC GATGTTGCAA CCGTTCACAA TGTTCGCCAG CACCAAAAAG GTGATGCTGA AATCTATGTC TCAAAGAGTG TTCAAGCAGA GTATGCGAAT AAAGGGGATT ACAAACCAGT TAAACATCAT GCTGACGGAA GTATCGTAAC TGATAGAAAG AACAAACCCA AAAGAGAAGA TCGTTACCAC TCTCATCAGA ATTATAAGGC GAAGGGAAAG GAAGACAAAA AGCTGCAACA TGATGGTAAT TTGCCAGACG AATATCGTAA CCAGCTTATG TCTCAGGATG AAAAACGCCA ACTAGACCAC ATCATTTCAT CGCATGAAGT CCATAATGAT GCGGGAAGAG TGCTTGCAGG GCTAGACGGC GTAGAACTTG CCAATCAGAA CTCAAATTTT CAATCGACAC ATTATTACAT CAACAACCTC AAGTCAGATC ATTCTATGGA TGATTTCTTA GGAACCGTTG TACCAAGGAC AATTGAGAAC AAGCGTAACA ATATTGAAAG AGATAAACTG CGTTTAGCTT CTATGCCCTC GGAAACTAAA CAGCAAAAGC ATGAAAAACG TAAACTAGCA GATAAAATCA CCAAGCAAAG TGAACAGGTT GCTGTTCTTG AGAGTCTTGA TGAAGACAAA ATGCGTGAGG CGGATAAGAG AGCAAGACAG CAGTACGATA AGCAGATCAA TTTCACTTAC TATACCAGCA GTAAGTTTTT TAAGAGTACT GCTATGGCGT CTAGTAAAGC TGGTTTCGCT ATGGGGGTTA GACAGGCATT AGGGCTTGTT CTTGCTGAAG TTTGGTTTGA AATAAAAGAT GCAATTCCTC AGATCTTTAA AGATAAAGAA GAAAATTTCA CACTTGATAA GTTCCTAAAT AAGCTAAAGG TTACCGCACT AAAAATTTGG GATAGGGTCA AAACTCGATT CAAAGATATT CTGGAAGAGT TTAAAAACGG GGCTTTAGCG GGTGCCCTGT CTAGCTTAAG TTCGACCATA ATGAACATCT TTTTCACCAC TCAAAAGTTG ATTGGAAAAC TCCTCCGTGA AACTTGGTCA AGTTTAGTTT CGGCTGCTAA AGTCTTGTTC TTTAATCCGC AGAGACTTAG CCCTGGAGCT TTGGTGCGAG AAGTTACACG TATTTTATCT ACTGGTGTTG CGGTTGCAAT GGGAGTGATG CTTAACCAAC AGTTAGCCTC GCTGATGACA TTTCCTCTCG GTATTGAACT AGCCTCGTTT GTTAGCGCGG TGGCTACGGG CATAATGACT ATTGGTATCA CATACTTTTT AGATCACAGT AAATTAATGC GAAAAGTATG GGATTACCTA GATCAGTTTA AGTCAGTAGA AAAGAGAACC TTGGAATACT TCCAGACGGT AAATGCTGAA CTTGATCGAT ACTTGATTGA GCTTTCCAAA GTTGAGTTTA ATCTTTCACC TGATGAACTA GCTGGACTTG TCGACAACTT AGAATCTGTT AGTTGTGAAT ACGAAAGAAG TATGATGTTG TCGAAAGAAG TAAGTCGAAG AGAGATAGAG TTACCTTTTG AAGACAACAA CCTAGATAGT ACTAGAGCTT GGTTGATGAG TTTATGA
|
Protein sequence | MSETNSQHFA LVDELNKTVT KSLVTTFGLD FLLFEDKKGG DVATVHNVRQ HQKGDAEIYV SKSVQAEYAN KGDYKPVKHH ADGSIVTDRK NKPKREDRYH SHQNYKAKGK EDKKLQHDGN LPDEYRNQLM SQDEKRQLDH IISSHEVHND AGRVLAGLDG VELANQNSNF QSTHYYINNL KSDHSMDDFL GTVVPRTIEN KRNNIERDKL RLASMPSETK QQKHEKRKLA DKITKQSEQV AVLESLDEDK MREADKRARQ QYDKQINFTY YTSSKFFKST AMASSKAGFA MGVRQALGLV LAEVWFEIKD AIPQIFKDKE ENFTLDKFLN KLKVTALKIW DRVKTRFKDI LEEFKNGALA GALSSLSSTI MNIFFTTQKL IGKLLRETWS SLVSAAKVLF FNPQRLSPGA LVREVTRILS TGVAVAMGVM LNQQLASLMT FPLGIELASF VSAVATGIMT IGITYFLDHS KLMRKVWDYL DQFKSVEKRT LEYFQTVNAE LDRYLIELSK VEFNLSPDEL AGLVDNLESV SCEYERSMML SKEVSRREIE LPFEDNNLDS TRAWLMSL
|
| |