| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001709 |
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| Symbol | |
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| ID | 8555338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 109044 |
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| End bp | 111005 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646404702 |
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| Product | 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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| Protein accession | YP_003284337 |
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| Protein GI | 262392483 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTGG CAGTTCACCC TATTTCCCTC GCAGTGTTAA GTGGCATGCT AACGCTTGCT
GGCCCTGCGA TGGCCGATAC CATCAAGCTT CGTATCATCG AAACCACCGA CATTCACACC
AACGTGATGG ATTACGATTA CTACAAAGAC CAACCATCAC AGCAAATCGG TTTAAGTCGC
GCCGCGACCA TAGTGAAGCA GGCAAAGTCA GAGGCTGAAA ACAGTGTATT AGTTGATAAC
GGCGACTTAA TTCAGGGCAG CCCAATGGGT GATTACATGG CGGCGAAAGG GATTAACGCT
GGCGATGTGC ACCCAGTCTA CAAGGCGATG AACCAACTAG ACTACGATGT GGGCAACATT
GGCAATCATG AGTTCAACTA TGGCCTAGAC TTTCTACAAA AGACGTTGGC GGGCGCTAAC
TTCCCTTACA TCAACGCAAA CGTATTTGAT AAAAAAACCG GTGAGCATTA CTTCAAGCCT
TACCTGATCA AAACCCACAC CTTTAAAGAC ACAAACGGCG AAGCGCATCA AATAAAAGTG
GGTTATATCG GCTTTGTACC ACCACAAATT ATGGTGTGGG ACAAGAAGAA CTTAGAAGGC
AAAGTCTTTG CTAAAGACAT TAAGGAAACG GCAGAAAAAC TGATTCCTCA AATGAAGAAA
GAAGGCGCAG ACGTGATTGT GGCGATTCCA CACTCGGGCA TTTCTACTGA CCCATACAAG
CTTGGCGCTG AAAACTCAGT TTACTACCTC ACAGAAGTTG AAGGTATTGA TGCGATTGCT
TTTGGCCACT CTCACGCGGT CTTCCCAGGG AAAGACTTTG CAAACCTACC TGGTGTTGAT
ACCGAGAAAG GGACCATCAA TGGTGTGACG TCAGTGATGC CTGGTCGCTG GGGAAGTCAT
GTAGGTGTGA TGGATTTGAT GCTGAAAGAG GAAGACGGCA GATGGCAAGT CGTCGAAGGC
CAAGCAGAAG CACGCCCTAT CTTCGATAAA GTAAATAAGA AGTCATTAGC TAAAGCCGAT
GAAGATATTG TGAAAGCGTT AGAAGAAGAT CACAAAGGCA CTCGTGAATT TGTAAACCAA
CCAATCGGCA AAGCAAATGA TGTCATGTAC AGCTTCTTGG CATTAGTGCA GGACGACCCA
ACCATTCAGA TCGTTAACCT TGCTCAGAAA GATTACGTGG AACGCTTTAT TCAAGGCGAC
CCAGATCTCG CTGACATTCC AGTATTGAGT GCCGCAGCAC CATTTAAAGT CGGGGGGCGT
AAGAACGATC CGAATAACTT CACGGAAGTA GAGTCCGGTC AGCTCACCTT CCGTAATGCT
GCCGATCTTT ATTTATATCC CAACACCTTG GTCGCGATGA AAGTGAAAGG TAAAGAGGTT
CGCGAATGGC TAGAGTGCAG CGCGGGTCAA TTCAACCACA TCGACATCAA CAATCCTGAA
CCGCAATCTT TGATTGATTG GGATAATTTC CGTACGTACA ACTTCGATGT CATTGATGGG
GTGAACTACC AGATCGATAT CACCCAACCG CCCAAATACG ACGCGAGTTG CAAAGTGATT
AATCCAGATT CACAGCGTAT CGTGAACCTG ACTTACAACG GTAAGCCAGT TGAACCAAAA
CAAGACTTCA TCATCGCAAC CAATAACTAC CGTGCTTATA GCAATACCTT CCCTGGTACG
GGCCCAGACT TTATTGCGTT TGACGCACCA GATGAAAACC GCTCTGTCGT CGCCGCTTAT
ATTTCTCGCG TGAGTGAAGA AAAAGGTGAA GTGACACCAA GCGCTGACAA CAACTGGTCT
TTCGCACCGA TTAAATCCGA TAAAAAGCTA GATATTCGCT TCGAAACATC TCCTAGCGAT
AAAGCGGCGC AATTCATTAA AGATAAAGGT CAATACCCAA TGAAACGTGT CGCGACTGAC
GATATTGGTT TCGCGATTTA CCAAATCGAT CTGAATAAGT AA
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| Protein sequence | MKVAVHPISL AVLSGMLTLA GPAMADTIKL RIIETTDIHT NVMDYDYYKD QPSQQIGLSR
AATIVKQAKS EAENSVLVDN GDLIQGSPMG DYMAAKGINA GDVHPVYKAM NQLDYDVGNI
GNHEFNYGLD FLQKTLAGAN FPYINANVFD KKTGEHYFKP YLIKTHTFKD TNGEAHQIKV
GYIGFVPPQI MVWDKKNLEG KVFAKDIKET AEKLIPQMKK EGADVIVAIP HSGISTDPYK
LGAENSVYYL TEVEGIDAIA FGHSHAVFPG KDFANLPGVD TEKGTINGVT SVMPGRWGSH
VGVMDLMLKE EDGRWQVVEG QAEARPIFDK VNKKSLAKAD EDIVKALEED HKGTREFVNQ
PIGKANDVMY SFLALVQDDP TIQIVNLAQK DYVERFIQGD PDLADIPVLS AAAPFKVGGR
KNDPNNFTEV ESGQLTFRNA ADLYLYPNTL VAMKVKGKEV REWLECSAGQ FNHIDINNPE
PQSLIDWDNF RTYNFDVIDG VNYQIDITQP PKYDASCKVI NPDSQRIVNL TYNGKPVEPK
QDFIIATNNY RAYSNTFPGT GPDFIAFDAP DENRSVVAAY ISRVSEEKGE VTPSADNNWS
FAPIKSDKKL DIRFETSPSD KAAQFIKDKG QYPMKRVATD DIGFAIYQID LNK
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