| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001701 |
|---|
| Symbol | |
|---|
| ID | 8555330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 99781 |
|---|
| End bp | 101040 |
|---|
| Gene Length | 1260 bp |
|---|
| Protein Length | 419 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646404694 |
|---|
| Product | ABC-type antimicrobial peptide transport system permease component |
|---|
| Protein accession | YP_003284329 |
|---|
| Protein GI | 262392475 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTG TTGCAAAGCT CGCGTGGAAG AGCTTAATCA ATCGTAAGGC GACGGCAATA
TTAACCATCA TGACAGTCGC GATTTCTGTC ATACTCCTTT TAGGAGTAGA ACGCATTCGT
ACTCAGGCAA AAGATAGCTT CGCCAATACA ATTTCAGGCA CCGACCTCAT CATTGGTGGC
CGTTCTGGAC AAGTGAACTT GCTGCTCTAC TCTGTGTTTC GCATTGGCAA TGCCACCAAC
AACATTGACT GGAAGAGCTA CCAAGAGTTT GCCAATCATC GAGCAGTAGA TTGGGCGATT
CCAATCTCAC TTGGCGACTC GCACAAAGGG TTCCGAGTCA TGGGAACCAA CCACAGCTAT
TTTGAACACT ATAAATTCGG AAGTAAGCAA TCACTAACCT TTTCAGAAGG CCGAAAATTC
AATGGTTTAT TTGAAACCGT GCTCGGTTCT GATGTCGCAA AACAACTGGG GTATCACGTC
GGTAGTGAAA TCATCATTGC CCACGGCATT AGTGATGTAG GCTTTAGCCG ACATGACAAC
CTGCCATTCA AAGTTGTCGG GATTCTTGCG CCCACTGGCA CGCCAGTCGA CAAAACCGTT
CATGTATCGC TAGAAGCCAT CGAAGCCATC CACGTCGGAT GGGAAAGCGG TGCACGTTTA
GGCCCAACAC CCAAAGCACA AGACCTCAAA AACAGAGACT TTCAGCCCAA GCAAATTACC
GCGATGCTGG TCGGTTTGAA ATCTCGTATT CAGACTTTCG CCCTACAAAG GCAAATCAAC
ACTTATCCCA AAGAACCGCT TAGCGCGATT ATGCCCGGGG TTGCGTTGCA TGAACTGTGG
GGAATGATGT CTGTTGCCGA GCAAGCCTTA ATGGCAGTGT CTGGCTTTGT GGTGATTGCA
GGATTACTCG GCATGCTAAG CAGCTTATTA ACCAGCTTGC AGGAGCGCCG CCGTGAAATG
GCGATTTTGC GCGCTATGGG AGCAAGACCT CGTCATGTTT TCTCATTGTT AATCAGCGAA
GCCAGTCTAC TTACTGCTGC CGGAATCGTG ACCGGAGTGG CAGGGCTGTA TGCCATTCTC
GCCATCGTGC AACCCATCAT TCAACAGCAT TATGGAATAC ATCTGACTTT AAGCCTCTTA
TCGCCCTATG AATGGATGTT ATTAGGTTTC GTACAATGCG CTGGAATTGT AATTGGTTTC
ATCCCGGCTT TTCGCGCCTA CCGACAGTCA CTAAGTGACG GAATGACAAT AAGGATTTAA
|
|---|
| Protein sequence | MSAVAKLAWK SLINRKATAI LTIMTVAISV ILLLGVERIR TQAKDSFANT ISGTDLIIGG
RSGQVNLLLY SVFRIGNATN NIDWKSYQEF ANHRAVDWAI PISLGDSHKG FRVMGTNHSY
FEHYKFGSKQ SLTFSEGRKF NGLFETVLGS DVAKQLGYHV GSEIIIAHGI SDVGFSRHDN
LPFKVVGILA PTGTPVDKTV HVSLEAIEAI HVGWESGARL GPTPKAQDLK NRDFQPKQIT
AMLVGLKSRI QTFALQRQIN TYPKEPLSAI MPGVALHELW GMMSVAEQAL MAVSGFVVIA
GLLGMLSSLL TSLQERRREM AILRAMGARP RHVFSLLISE ASLLTAAGIV TGVAGLYAIL
AIVQPIIQQH YGIHLTLSLL SPYEWMLLGF VQCAGIVIGF IPAFRAYRQS LSDGMTIRI
|
|---|
| |