Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001701 |
Symbol | |
ID | 8555330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 99781 |
End bp | 101040 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404694 |
Product | ABC-type antimicrobial peptide transport system permease component |
Protein accession | YP_003284329 |
Protein GI | 262392475 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCTG TTGCAAAGCT CGCGTGGAAG AGCTTAATCA ATCGTAAGGC GACGGCAATA TTAACCATCA TGACAGTCGC GATTTCTGTC ATACTCCTTT TAGGAGTAGA ACGCATTCGT ACTCAGGCAA AAGATAGCTT CGCCAATACA ATTTCAGGCA CCGACCTCAT CATTGGTGGC CGTTCTGGAC AAGTGAACTT GCTGCTCTAC TCTGTGTTTC GCATTGGCAA TGCCACCAAC AACATTGACT GGAAGAGCTA CCAAGAGTTT GCCAATCATC GAGCAGTAGA TTGGGCGATT CCAATCTCAC TTGGCGACTC GCACAAAGGG TTCCGAGTCA TGGGAACCAA CCACAGCTAT TTTGAACACT ATAAATTCGG AAGTAAGCAA TCACTAACCT TTTCAGAAGG CCGAAAATTC AATGGTTTAT TTGAAACCGT GCTCGGTTCT GATGTCGCAA AACAACTGGG GTATCACGTC GGTAGTGAAA TCATCATTGC CCACGGCATT AGTGATGTAG GCTTTAGCCG ACATGACAAC CTGCCATTCA AAGTTGTCGG GATTCTTGCG CCCACTGGCA CGCCAGTCGA CAAAACCGTT CATGTATCGC TAGAAGCCAT CGAAGCCATC CACGTCGGAT GGGAAAGCGG TGCACGTTTA GGCCCAACAC CCAAAGCACA AGACCTCAAA AACAGAGACT TTCAGCCCAA GCAAATTACC GCGATGCTGG TCGGTTTGAA ATCTCGTATT CAGACTTTCG CCCTACAAAG GCAAATCAAC ACTTATCCCA AAGAACCGCT TAGCGCGATT ATGCCCGGGG TTGCGTTGCA TGAACTGTGG GGAATGATGT CTGTTGCCGA GCAAGCCTTA ATGGCAGTGT CTGGCTTTGT GGTGATTGCA GGATTACTCG GCATGCTAAG CAGCTTATTA ACCAGCTTGC AGGAGCGCCG CCGTGAAATG GCGATTTTGC GCGCTATGGG AGCAAGACCT CGTCATGTTT TCTCATTGTT AATCAGCGAA GCCAGTCTAC TTACTGCTGC CGGAATCGTG ACCGGAGTGG CAGGGCTGTA TGCCATTCTC GCCATCGTGC AACCCATCAT TCAACAGCAT TATGGAATAC ATCTGACTTT AAGCCTCTTA TCGCCCTATG AATGGATGTT ATTAGGTTTC GTACAATGCG CTGGAATTGT AATTGGTTTC ATCCCGGCTT TTCGCGCCTA CCGACAGTCA CTAAGTGACG GAATGACAAT AAGGATTTAA
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Protein sequence | MSAVAKLAWK SLINRKATAI LTIMTVAISV ILLLGVERIR TQAKDSFANT ISGTDLIIGG RSGQVNLLLY SVFRIGNATN NIDWKSYQEF ANHRAVDWAI PISLGDSHKG FRVMGTNHSY FEHYKFGSKQ SLTFSEGRKF NGLFETVLGS DVAKQLGYHV GSEIIIAHGI SDVGFSRHDN LPFKVVGILA PTGTPVDKTV HVSLEAIEAI HVGWESGARL GPTPKAQDLK NRDFQPKQIT AMLVGLKSRI QTFALQRQIN TYPKEPLSAI MPGVALHELW GMMSVAEQAL MAVSGFVVIA GLLGMLSSLL TSLQERRREM AILRAMGARP RHVFSLLISE ASLLTAAGIV TGVAGLYAIL AIVQPIIQQH YGIHLTLSLL SPYEWMLLGF VQCAGIVIGF IPAFRAYRQS LSDGMTIRI
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