| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001505 |
|---|
| Symbol | |
|---|
| ID | 8559817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1697352 |
|---|
| End bp | 1698338 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646409174 |
|---|
| Product | Putative GTPase (G3E family) |
|---|
| Protein accession | YP_003288653 |
|---|
| Protein GI | 262396800 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0523] Putative GTPases (G3E family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000327168 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATC GAGTACCAAC CAACATACTG ACCGGATTTT TGGGTGTCGG TAAAACGACC
ACGATTTTAA ATCTACTGAA GAACAAACCG GAAAACGAAA GCTGGGCGGT TTTGGTCAAT
GAATTTGGTG AGATTGGCAT CGACGGTGCA TTGATGACCG ACCAAGGTGC GCTGATTAAA
GAAGTGCCGG GTGGCTGTAT GTGTTGCACG GCGGGCGTGC CAATGTCGGT CGGTATTACC
GCGTTACTGC GCCAAAAACC GGACCGTTTA TTGATTGAGC CGACAGGCCT TGGTCATCCA
AAACAGGTTA TCGCGACGCT TACCTCAGAA CAGTATGAAC CTTACGTTGA TCTAAAAGCG
ACGATCGCTC TGGTTGATCC GCGTAACTTA AGTGATGAAA AGTACCTTTC TAACCAAAAT
TTCGTGGACC AGTTAGACAG CGCAGATGTG GTTATAGGCA GTAAGGTTGA CCTTTGTACC
AGTCACGACA TTGATGTGTT TAATGACTGG GTGACGGACC AATCTCCCTC AAAAGTATTC
AGTAAGCTTA TTCATGATGG TGAGTTACCG ATAGAAGTCT TGGATATCGA ACGGGTTTAC
GGCAGCGCTT CTTCCCATAT CGAGTCACAT CATCATGAAC ATGCTCACCA AGAGCCTCAA
TTCCAGTTGC CGCCAGGTGA AACCTTTGTG CGCAAAGAGA ACAAAGGGCA AGGGTATTTT
AGCTGCGGGT GGTTGTTTGG GGCAGAGTAC ACGTTTGATT TTGATAAACT TTTCTCAATG
CTTTCGGACT TAACGGCGGA ACGTGTTAAA GCGGTGGTCA ACACAGATCA GGGGTGTTAC
GCGTTTAATG TTGCCAACCG AGTCGTGTCG GTGAATGAAA TCAGCTTAGA AGGGTTTGAA
TCACGATTAG AAGTGATAGA TTCTCAGCTG TTGCCATGGG ATGAACTTGA GCAAATTCTC
CTTCAGTTGT CTGGCATCAA GCGTTAA
|
|---|
| Protein sequence | MSNRVPTNIL TGFLGVGKTT TILNLLKNKP ENESWAVLVN EFGEIGIDGA LMTDQGALIK
EVPGGCMCCT AGVPMSVGIT ALLRQKPDRL LIEPTGLGHP KQVIATLTSE QYEPYVDLKA
TIALVDPRNL SDEKYLSNQN FVDQLDSADV VIGSKVDLCT SHDIDVFNDW VTDQSPSKVF
SKLIHDGELP IEVLDIERVY GSASSHIESH HHEHAHQEPQ FQLPPGETFV RKENKGQGYF
SCGWLFGAEY TFDFDKLFSM LSDLTAERVK AVVNTDQGCY AFNVANRVVS VNEISLEGFE
SRLEVIDSQL LPWDELEQIL LQLSGIKR
|
|---|
| |