Gene VEA_001346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001346 
Symbol 
ID8559658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1530543 
End bp1531142 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content44% 
IMG OID646409015 
Productleucine-rich repeat protein 
Protein accessionYP_003288494 
Protein GI262396641 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0229111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTTG TTTCCCTTTT CCTTACCTTG ATGCTGCTCT GCTTCCCATC TTTCGCATAT 
GAGCTAGATT ACTACTCTAA GTTTGGTCAC ACAGATAATT ACGGTAATCT TGATCTACGA 
AACAAACCTT ACACCCAATT ACCTTCTGGG TTAGTGGTCA AAGGCAACTT AAATATCTCG 
CAAACCCCGA TCAAAAAGCT GCCTAAGGGG CTTGATGTTG GAGGCAGTTT GGAAGCAACC 
AACAGCGCAC TCAAAACCAT TCGCTCAGGT ACAAAGATAA AAGGTTATGC GAATCTACTG 
GGTAGTAAGA TCGAAAACTG GCCTAGGGGC ATCAAACTCG GCGGTTATCT GAACTTGACG 
GATACACCAT TAAAAACGCT CCCAGCTAAA CTTCGAGTCA AAGGCGATTT AAGTCTTATT 
CGCACTCCTA TCTCTGCTCT TCCTGAAGGA TTGGTGGTTG ATGGTAACCT TTATATAGGA 
GGATCAGCGC TACAAGTATT TCCAGACACG ATGACGGTGA AAGGGAATAT CTTTTTAGGT 
GGCAACAAGA TTACCAAGTG GCCTAGCAAT TTAACCCTTG GCGGGGCTGT TGCTCCTTAA
 
Protein sequence
MRFVSLFLTL MLLCFPSFAY ELDYYSKFGH TDNYGNLDLR NKPYTQLPSG LVVKGNLNIS 
QTPIKKLPKG LDVGGSLEAT NSALKTIRSG TKIKGYANLL GSKIENWPRG IKLGGYLNLT 
DTPLKTLPAK LRVKGDLSLI RTPISALPEG LVVDGNLYIG GSALQVFPDT MTVKGNIFLG 
GNKITKWPSN LTLGGAVAP