| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001257 |
|---|
| Symbol | |
|---|
| ID | 8559569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1425182 |
|---|
| End bp | 1427320 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 646408926 |
|---|
| Product | TonB-dependent heme receptor HutR |
|---|
| Protein accession | YP_003288405 |
|---|
| Protein GI | 262396552 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.299412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTTA CCCCAGTGTC AGCGGCAGTA CTTTCGGTAC TAGCTGCCAG CCAAGTGCAC
GCCAAATCTG ACGTTTTCTC TATGGAAGAG GTCGTGGTGA CGGCGAATCG GATTGAACAA
CCAATGTCTG AACTAGCAGG CAGCGTCGCA GTTGTCACTA GCGAAGAGAT TGAACAAAAG
GGCGAAACAG AGCTTTATGA TGCGCTGCGT CATGAACCTG GGGTAAGTGT GTCGGGTGGC
GCTGGGCGTC CACAAAACAT CACGATTCGA GGCATGACGG GTAACCGCAT TATGATCATT
CGTGACGGCA TTCGCTCAGC AGACGGTTTT GGTGCGAATG ACAGCAATGA CAAAGTGGGC
CGCGATACGT TTGATCTTTC TAATTTGGAA TCATTAGAAG TAGTGAAAGG GGCGAGCTCC
TCAGTCTTAG GTTCTGGTGC TATCGGTGGC GCTGTGATTC TAAAATCCAA ACAGCCGGGC
GAGTTTTTAA AAGATCGTGA CTTTTATGTT GATGCCACGG GCACGTACAC GGGGATCAGC
AATAAATACA AAGGCGCGAG CAATCTGGCA TTTCGTTCTG GCGACACGGA AAGCTTAGTC
AACGCGGCGT ATTGGCAAGG TGAAGAGACG CGTAACTTCA GCCAAGATTT GTACAACCGC
GATTTGGATG GTTACAGCGC GTCATACGCC ATCAATCATT TCCTCAATGA TGAAGTGATG
GTCAAAGCGC GTGCCGAACT TTATCGGCAA GACCAACAAC GCCTGGAAGG TTCGCCATCT
ATACAGAAGG ATGGCAAATG GCATATCGAA GACTTCGCAG AAGATGAATC GACAAAAGAG
TACAGCGCTT ACATTGGTGC AGAGGTTACA CCGATTAATC CAACTTGGTT CGAAGAGTTA
GATACAAAGG TCTACTGGCG CCACACCGAA GTGGTGGAAG ACACGAATCG TTTAATGAGA
CAAGTTGACC ACAATGGTTT GACTGTTAGA CGTCGCGAGC TAGAACACAA AACCTTCATT
GACGAAACAA TTGGCTTCCG TGGTGATTTC ACCAATACGA TTTATGCTGC AAATGCTGAG
CACCAATTGG CTTACGGTAT CGAACTTTCT ACTGACTATT ATGAACGCAC AGATAGCGAT
TCCAAGATTG ATTGGAACGG GGTAACGCCT TCGACCAAAC AACCTTTCGC TCCTGCTCGC
GCTTATAACA TTGGTCTGTA CGTTCGAGAC ATGGTGGAGC TGGATAAATG GACCATTACA
GGCGGCCTGC GCTTTGATGC GCATCGTCTA ACACCGGACG GTGAGGGTGA AGTGGGCGGT
TTCCCATTAA AAGACATGGA TAGCTCAGAG GTATCTCCAA GCCTATCGAT TTCTCGTGAA
GTGTTTGCCA ATAACATCGC TTATGTATCT TATAACCACG GTTATCGTGC TCCGGAATAC
GACAAAGCGT ATGGCTTCGT AAACCATGAC TTTGTGCCGC TAACGCCGTT TGTCATTGCA
CCGAACATGG ACCTAGAGGC TGAAACTTCG GACTCGTTTG AAATCGGTAA CAAATTCGAT
AATGGCCGCG CGCAACTTTA CGTTTCTGCG TTTTACAACA AGTTCCAGAA CTTCATCGAT
GTTGTTACCA CAGGGCAAGA TAACTTCGGT AACTACATCA AGCAATACCA AAACTTACAC
GGCGTTGAAA CCTACGGCGC GGAGCTTTCT GCCGCGTATG CTTTCACATC GTCTTGGAAG
CTAAGTACCA AGCTTGGTTA TGTTGACGGA AAGGATGCCG AAGGCGAGTA CGTTCGTAGC
ATCACACCTT TCGAGGGCAA TGTTGGGCTG AACTATCAGC AGCAAGACTT TAATGCGTTC
GCGACGTGGA ACTGGGCTGG TTCGATGGAT CGTGTGCCGA GTTGCCAAAC GTCACTTGGA
CAAAAGACCG AGTGCGCACA AACAGATTCA TGGAACACGT TCGATTTGGG GGCAAGTTAC
CAAATCACCA AAGATTTTCG TTTGAGTGCG ACCATCATCA ACCTGTTCGA CAAAGAATAC
ATTCGCTACC AAGACATTGC TGGCATAGCA GATGAGAGCA AACGCTACTC AACGGAACCA
GGTCGTTACT TTACGGTTAA CGCGAAATAC GTCTTTTAG
|
|---|
| Protein sequence | MKLTPVSAAV LSVLAASQVH AKSDVFSMEE VVVTANRIEQ PMSELAGSVA VVTSEEIEQK
GETELYDALR HEPGVSVSGG AGRPQNITIR GMTGNRIMII RDGIRSADGF GANDSNDKVG
RDTFDLSNLE SLEVVKGASS SVLGSGAIGG AVILKSKQPG EFLKDRDFYV DATGTYTGIS
NKYKGASNLA FRSGDTESLV NAAYWQGEET RNFSQDLYNR DLDGYSASYA INHFLNDEVM
VKARAELYRQ DQQRLEGSPS IQKDGKWHIE DFAEDESTKE YSAYIGAEVT PINPTWFEEL
DTKVYWRHTE VVEDTNRLMR QVDHNGLTVR RRELEHKTFI DETIGFRGDF TNTIYAANAE
HQLAYGIELS TDYYERTDSD SKIDWNGVTP STKQPFAPAR AYNIGLYVRD MVELDKWTIT
GGLRFDAHRL TPDGEGEVGG FPLKDMDSSE VSPSLSISRE VFANNIAYVS YNHGYRAPEY
DKAYGFVNHD FVPLTPFVIA PNMDLEAETS DSFEIGNKFD NGRAQLYVSA FYNKFQNFID
VVTTGQDNFG NYIKQYQNLH GVETYGAELS AAYAFTSSWK LSTKLGYVDG KDAEGEYVRS
ITPFEGNVGL NYQQQDFNAF ATWNWAGSMD RVPSCQTSLG QKTECAQTDS WNTFDLGASY
QITKDFRLSA TIINLFDKEY IRYQDIAGIA DESKRYSTEP GRYFTVNAKY VF
|
|---|
| |