| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001246 |
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| Symbol | |
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| ID | 8559558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1410708 |
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| End bp | 1412291 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408915 |
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| Product | GGDEF family protein |
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| Protein accession | YP_003288394 |
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| Protein GI | 262396541 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.436694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACAAC TGCTTAGCAA GGTTACTGAC GCAGGCATCG ATCCTTCTTC CGTCTCTGGT
GAAGAAGCGA TTACGCTGTG GGAGCACATC GGGTTACATA TTGCATCCAC GAACCGAGAA
AAAGCACATT GCTATATCAT TAGTGCCGAG TATCGACGAG AAATTAAACA GCTCAACGAC
AGCATCGAAG AACTACGACA AGCCCTTGAG TTGCTCGTTT TACCCGACGA TGTAGAAGAT
ATTCTGTCTG TAAAAGCAAG CTTGAGTGAT CGTTTAGTAG AAGTAGGTGA CTACAACGCA
GCATTAACCG AGTATGTTGC TGCAACGAAT ATCGCCGTCG AATATGGCTA TATTGATGAG
TACGTACTGG CTATTATTGG AATGGGCAAT TTGTGCGATG CCTATGGGGA TCACCATCGT
GCTTTGCGTT ATTACCAAAA AATCGATGCG ATCGATCACG CCATTAGCAG TCGCTCCCTA
CGTCTGCGCT ACAAGCTTTA CATGCTTGCT TGTTACATCA GTTTGAACCG TACCGCAGAT
GCACAAGAAT TATTGAGTGA GTGTGAAGAG CTAAGTATCC TCGTCAGTGA TAAAAACCTT
GCTGCGCAAA TTCATCTCTA CCGAGCCAAA CTGCATCGTT TGCAAGAGGA TTACCCTAAC
GCATTGCTTG CTATCTCGAA TGTTCAGTAT ACGACGGGCA GTGCTACCAC GTACTGGTTG
TCCACAATGG TCAAAATCGA GACCGCATAT TGTCTAAACG GTGTCGGACA CATCTCTTTA
GCCAACTTAG TGTTGGACTC TATCGGTAAA CGAATTCAGA AGCACTCTTC TCCTCTTGTC
GCTCAGCATT TTTACAACGC GATGAGTCAA GTTTACGCTT CTCAAGGGTT ATTTCAGAAA
GCATTAAACT GTGAAAAAAA AGCGTTTCGC ATTGAATCTG ACCTTGTCAA ACACATTCCA
ATTGGTGAAT TGGGTTCCAC TCAATTACGT CGACTTTCTC GTTTTGAGCT ACAGCTCAAA
CTCATTTTGT CAGAACTTGA AAACAAAGAA CTCAAGGAAA CCACCAAACA ACATAAGAAT
ACGGTCGCCC AACTACAGCA AGATGTCTTT ACTGACCCGC TGACCTCTTT GCACAACCGA
CGTTGGTTAG AAGTCAAACT CAAAGACCTG CTTTTGCACG ATACTGAATT TGCGTTGATG
GTCATCGATA TTGACCACTT TAAGTCCATC AATGACGAGC TCAGTCACCT TGTTGGAGAC
AAAGCGATTA AACGTGTGTC TCAAGAATTA GCAGGATACT TCAAATTTAA AGGCGCTTCT
TGCGTTCGCT TTGGCGGTGA AGAGTTTCTT GTCATTCTAG AGAATAGCAA TCTAGAACGG
GCAGAAATGC ATGCCGAGAA TTACCGCGAA CGCATTTATC AATATGGTTG GGACGATATT
CTTGGCGAGC GGGGGTTGAC CGTATCGATC GGGATTACCT TACATCGAGA AGGAGAGAAT
ACCCAACGAA CCTTCTACCG CGCCGACAAA GCCTTGTACC GCGCCAAAGC CAATGGCCGA
AACCAAGTCT GTACCGAACT TTAA
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| Protein sequence | MEQLLSKVTD AGIDPSSVSG EEAITLWEHI GLHIASTNRE KAHCYIISAE YRREIKQLND
SIEELRQALE LLVLPDDVED ILSVKASLSD RLVEVGDYNA ALTEYVAATN IAVEYGYIDE
YVLAIIGMGN LCDAYGDHHR ALRYYQKIDA IDHAISSRSL RLRYKLYMLA CYISLNRTAD
AQELLSECEE LSILVSDKNL AAQIHLYRAK LHRLQEDYPN ALLAISNVQY TTGSATTYWL
STMVKIETAY CLNGVGHISL ANLVLDSIGK RIQKHSSPLV AQHFYNAMSQ VYASQGLFQK
ALNCEKKAFR IESDLVKHIP IGELGSTQLR RLSRFELQLK LILSELENKE LKETTKQHKN
TVAQLQQDVF TDPLTSLHNR RWLEVKLKDL LLHDTEFALM VIDIDHFKSI NDELSHLVGD
KAIKRVSQEL AGYFKFKGAS CVRFGGEEFL VILENSNLER AEMHAENYRE RIYQYGWDDI
LGERGLTVSI GITLHREGEN TQRTFYRADK ALYRAKANGR NQVCTEL
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