Gene VEA_001236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001236 
Symbol 
ID8559548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1400972 
End bp1401472 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content47% 
IMG OID646408905 
Producthistone acetyltransferase HPA2 
Protein accessionYP_003288384 
Protein GI262396531 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.993571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTA TCGTACGTCC AACAACCGTT GAAGACGCAG CGGCACTCGT AGAAATCTAT 
TCACAACCAA AAGCACAACG TGAAACCCTG CAACTCCCAA AACCTTCGCT CGCAATGTGG
GTAGAACGAT TGTCAAATAT GCCCGCTGGC GTTTACAGCT ACGTCGCTGA AATCGATGGT
AAAGTAGTGG GTAACATTGG CTTTCACCAC TCGCAGCGTC CGAGAACAAT GCACACAGCA
TCATTTGGCA TCGGAGTGCA TGATAGTTTC CACGGGCTCG GTATTGGTAG CAAGTTGATT
GAAACGGTCA CTGAACTGGC GGATAACTGG CTAAACGTGA GAAGAATTCA AATAGAAGTC
AACGCCGATA ATGACGCCGC CATTGGGCTG TACAAAAAAC ATGGATTTCA AATTGAGGGC
GAAGCGATTG ATGGCTCCTT CCGAGATGGC GAGTTCATCA ATACCTATTA CATGGCACGT
ATCAGACCAA GTAAAAAGTA A
 
Protein sequence
MEIIVRPTTV EDAAALVEIY SQPKAQRETL QLPKPSLAMW VERLSNMPAG VYSYVAEIDG 
KVVGNIGFHH SQRPRTMHTA SFGIGVHDSF HGLGIGSKLI ETVTELADNW LNVRRIQIEV
NADNDAAIGL YKKHGFQIEG EAIDGSFRDG EFINTYYMAR IRPSKK