| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001192 |
|---|
| Symbol | |
|---|
| ID | 8559505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1357027 |
|---|
| End bp | 1357917 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646408863 |
|---|
| Product | transcriptional regulator LysR family |
|---|
| Protein accession | YP_003288342 |
|---|
| Protein GI | 262396489 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAT TAGTCCCTCT AAAATCCATC TATGCATTTG TCGCTGTAGC GGAATCTGGC
AGCATGACAG AAGCAGCGCA GATATTAAGT GTGAGTCATT CGGCGGTGAG TCAGGCGATA
AAATCACTGG AGACTCAGGT CAACAAACCT CTGTTTGATC GCGTAGGCAG ACAAGTTCAA
CTTAATGCTG ACGGTAAAAA ATATTATCGA AAGGTTGCGC CAGCTTTAGA ACAAATTGTC
GATGCCACAG AAGCGCTAAT CCAAGACCAA AACTTGCAAC GTATTACGCT TAATATGGTG
AATTCCTTGG CGCTGCATTG GTGGATTCCG CGAATGTCGA GTTTGCAGGA CTTTGCTCCG
CAATTAGACG TTCGTTTATC CAACCTGTCT GGCAGGTTTA ATTTAGAGCA AGAAGGTATC
GACGCTGCCC TCGTGCATGG AAACACCGAG GAATGGCAAG ATTATTACTG TGAAAAGCTC
AGTGAAGATG AACTGGTTTT GGTGTGTAGC CCTGAATTGA TAGCTAAGAC GAATGACTCA
AATATAGCTC AACTGTTAAA GCAGTATCCC ATCATTGAAG TCACTAACGA ACGAAGAAAA
AATGACTGGA ACGTGTGGCA GAATGCGACT GGCATCCTGC GACCTAAAAG CAAAAAACCA
ATCACTTTTA ATATGTCGAT ACAAGCCGTG CAGGCGACGA CTCGTCGTTT AGGCTTATTG
GTGACTCATC GCTTGTTTGT GAAAGATGAC ATCAAATATG GCCAGTTAAT CGAGCTGGGT
AAACCCGTCA TTAATCCTAA CCAACAGTTT TACTTTGTTT GCCCACCACA CAAGCTAAAG
TTGGAATCGT TTCATCTGCT GCGCTCGTGG TTGCAACAAT CATTCAATTA A
|
|---|
| Protein sequence | MRKLVPLKSI YAFVAVAESG SMTEAAQILS VSHSAVSQAI KSLETQVNKP LFDRVGRQVQ
LNADGKKYYR KVAPALEQIV DATEALIQDQ NLQRITLNMV NSLALHWWIP RMSSLQDFAP
QLDVRLSNLS GRFNLEQEGI DAALVHGNTE EWQDYYCEKL SEDELVLVCS PELIAKTNDS
NIAQLLKQYP IIEVTNERRK NDWNVWQNAT GILRPKSKKP ITFNMSIQAV QATTRRLGLL
VTHRLFVKDD IKYGQLIELG KPVINPNQQF YFVCPPHKLK LESFHLLRSW LQQSFN
|
|---|
| |