Gene VEA_001189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001189 
Symbol 
ID8559502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1354074 
End bp1355420 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content51% 
IMG OID646408860 
Productflagellum-specific ATP synthase FliI 
Protein accessionYP_003288339 
Protein GI262396486 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1157] Flagellar biosynthesis/type III secretory pathway ATPase 
TIGRFAM ID[TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA CCTTAAGCCA TGAGCTATTG AGTGAGCGTT TGAGCGAAGC ATTGGCTTCG 
CTCGATTCAA TCCCTGTTGC TCGCGTGACA GGGCGCTTGA TTAAAGTAAA CGGCTTAATG
TTACAAGCCG TTGGGTGCCG GTTTAAACTG GAGCAGCGCT GTCTCGTAGA AACCGCAGAA
GGCGACATGA TCGAAGCGCA AGTGGTGGGC TTTGAGCACA CTATTGCTTA CCTAATGCCT
ATTCGGCGCT TAGGTGGCTT ATTTGCTGGT GCGAAAGTCA TTCCTCTGGA CGGTGACAGT
ACCGTGCAGT TAAGTGCTCA GTGGTTAGGG CGAGTGCTGA ATGGTTTAGG TGAGCCGTTG
GACGACGGGG CACCGCTTAA AGGGGGAGAT CGTGTTTCAC TTGAACCAAA ACCGATTAAC
CCATTGAAGC GACGTCCTGT TGATACCCCA CTCAACGTTG GGGTGCGCGC AATCAATGGA
CTCTTGACCG TCGGAAAAGG TCAACGCATT GGCTTAATGG CGGGCAGTGG TGTCGGTAAA
AGTGTTTTAA TGGGGATGAT CACCAAAAAC ACCGAAGCCG ATGTGATTGT GGTCGGTCTT
ATTGGTGAGC GAGGCCGAGA GGTACGCGAG TTCATCGAAC GAAACTTAAC CCCAGAGGCG
CGCAAGAAGG CGATTATCAT CGCAGCTCCT GCTGATGAAT CCCCGCTGAT GAGGTTAAGA
GCGACACTGC TTTGTCATCG CGTTTCCGAG TATTTTCGAG ACCAAGGCAA AGATGTTCTG
TTGTTGATGG ACTCTCTCAC TCGATATGCC ATGGCACAGC GTGAAATCGC TCTTTCGCTT
GGCGAGCCTC CGGCATCTCG CGGTTATCCG CCCTCTGTCT TCAGCGTGTT ACCGCAACTC
CTTGAGCGTG CGGGCAACAG TGAAAATCAG CACGGTAGCC TAACCGCAAT TTATACCGTG
TTGGCGGAAG GGGACGACCA GCAAGATCCT GTCGTGGATT CTGCGCGTGC TATCTTAGAT
GGGCACGTCG TATTATCGCG TCAACTTGCC GAGCAAGGGC ACTACCCTGC CATTGATATT
AATGCGTCTA TCAGCCGTTG TATGAGCACC TGTACACAGG AGGCGCATAG CACGATCGCG
AATAATTTCC GCCAGATGTA CTCCAACTAT CTTCAGGTGA AAGAACTGCT GCCGTTAGGA
GGCTATCAAC CGGGGCAAGA TCCTGAATTA GATCAATCTG TTGCTATGTA TCCAAACTTA
CGTGCGTATT TACAACAAGC CGCCAATGAG TCAGTGGATT ACCCAACCAG TTTGACCGAG
CTCGCGCAGC TTTTTCAAAG TGCTTAA
 
Protein sequence
MSNTLSHELL SERLSEALAS LDSIPVARVT GRLIKVNGLM LQAVGCRFKL EQRCLVETAE 
GDMIEAQVVG FEHTIAYLMP IRRLGGLFAG AKVIPLDGDS TVQLSAQWLG RVLNGLGEPL
DDGAPLKGGD RVSLEPKPIN PLKRRPVDTP LNVGVRAING LLTVGKGQRI GLMAGSGVGK
SVLMGMITKN TEADVIVVGL IGERGREVRE FIERNLTPEA RKKAIIIAAP ADESPLMRLR
ATLLCHRVSE YFRDQGKDVL LLMDSLTRYA MAQREIALSL GEPPASRGYP PSVFSVLPQL
LERAGNSENQ HGSLTAIYTV LAEGDDQQDP VVDSARAILD GHVVLSRQLA EQGHYPAIDI
NASISRCMST CTQEAHSTIA NNFRQMYSNY LQVKELLPLG GYQPGQDPEL DQSVAMYPNL
RAYLQQAANE SVDYPTSLTE LAQLFQSA