Gene VEA_001173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001173 
Symbol 
ID8559486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1337894 
End bp1339216 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content42% 
IMG OID646408844 
Producthypothetical protein 
Protein accessionYP_003288323 
Protein GI262396470 
COG category[S] Function unknown 
COG ID[COG2604] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCAG TTTATTCTCA ACATATTGAT ATCATTCGCT CTCGTTGGCC TGACGTAGCA 
AAAGCCTTAG ACAGTGCAGA CTTTAGCGAC TTACACTTTG AAGTAGTTGA AAAAGCAGCG
ATGACCCTAA AAGTCAACGG AGTTCAACTT AGCAGTGCTT ATGACCCGGT CGAAGAAGCC
TTCCAGTACC GAAGCCTAAC GTCTAGCGAC GATTATCATA TTTGGGGCAT CGGTATGGGC
AATGTCCCAT CCCTGTTAAC ACAAGATAAA AATGCTCGAT CAATTCGTGT TTATCTTTAT
AACCTACCGT TAGCAAAATT GGTGCTTTCT CTCGTTCCAC AACAATGGAT ATCCGATCCT
CGTGTTTCGT TGATCATCGT CTCAGAAGAC CAAAGCGATA TAGGTAGAAA ACTCGCGAGC
CTTACTTGGG ATGATTGTAT CATTCTCAAT GCCGACAGAG CCATTTCGCG TCATACTCAT
CAATGGCTTT ATTTCCGCTT AGAAAACCGT GTTTTGATCG GCTATGCAAA CGCTAGCTAT
AGACATAGCG ATGAAGAACT GCTCACAAGA GAGAAAGAAA ACGAACCTCT TTTAAAACGC
CTAAACTCTT CTGATCATTA TCTTATGTAT CAAGTAGACG ACGCTATTTG TATTGGTGCT
GGCCCATCAC TCCAGCATCA TATTGAAGAG TTAAAAACAG TCTATAACCG ACCAAATCGT
CCCAAGCTTA TTGCTGCATC AACTGCATGC AAGTGCTTAA TTGAAAATAA CATCAAACCA
GATGTCGTAT TTGCTGTAGA TTTAAATTTA GGTGACGAAC ATATTCCATA TGAGATCGCC
AAAAATACTA TTTTGGTGTT TGGTAGCCAT ATGCCTAGCC GTATTTTCCA AAACTGGCAT
GGCGAGAAGT ATTACTTACA CTTGGGTGAC TTCACATACG ACAGATTTGC AAGCAAACTA
CCGGTTAAAT ATCGCCCTTA CTCGTTTGGT TCGGTAATCC ATCCTCTAAT CCACTTCACC
CTTTTACAAG GTGCTACCCA AGTATCACTA ATCGGATGCG ACTTTGGTTT CCCTGGAGAT
ATCATCCATT CAGGACGCGA AAACAGACCA GACGACCCGA ACGCGACGAT GACAGCACGA
GTAGAGAATG GTTATGGTGA GATGATCAAA ACCTCACCAG CCTACCGCAT GTTTGGAAGC
GGTGTTGAGA ACCTAATAGC AGCATCACCA CAGACCAAGT TTTACAATTG GAGCCGTATT
GGTGCAAAAA TTATTGGTGC TGAATATTTC AATGTGGAGG AACTATATGG CAACCGAGAT
TAA
 
Protein sequence
MTPVYSQHID IIRSRWPDVA KALDSADFSD LHFEVVEKAA MTLKVNGVQL SSAYDPVEEA 
FQYRSLTSSD DYHIWGIGMG NVPSLLTQDK NARSIRVYLY NLPLAKLVLS LVPQQWISDP
RVSLIIVSED QSDIGRKLAS LTWDDCIILN ADRAISRHTH QWLYFRLENR VLIGYANASY
RHSDEELLTR EKENEPLLKR LNSSDHYLMY QVDDAICIGA GPSLQHHIEE LKTVYNRPNR
PKLIAASTAC KCLIENNIKP DVVFAVDLNL GDEHIPYEIA KNTILVFGSH MPSRIFQNWH
GEKYYLHLGD FTYDRFASKL PVKYRPYSFG SVIHPLIHFT LLQGATQVSL IGCDFGFPGD
IIHSGRENRP DDPNATMTAR VENGYGEMIK TSPAYRMFGS GVENLIAASP QTKFYNWSRI
GAKIIGAEYF NVEELYGNRD