Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001154 |
Symbol | |
ID | 8559467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1320991 |
End bp | 1321665 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646408825 |
Product | transaldolase |
Protein accession | YP_003288304 |
Protein GI | 262396451 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00875] fructose-6-phosphate aldolase, TalC/MipB family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000861143 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGAAC TCTATTTAGA TACTGCTGAC GTGGCAGAAG TAAAACGCTT TAACCAATGC CTACCTCTGA AAGGGGTAAC CACAAATCCA AGTATTTTGG CGAAGTCAAA ACAAGGCTTG AACCAAACCT TAGCTGGTAT GCAAGAAGCG TTAGGGGGCA CACCCCGTTT CCATGCTCAA GTGGTGAGCA CAACTGTAGA AGGCATGGTA GAAGAAGCGC GCCAAATCCA TGAATTACCC TATGATATGG TCGTCAAAGT GCCAGCAACC GAAACGGGCT TAGCGGCAAT TAAGTTAATG AAAAAAGAGG GAATTCAAGT GCTCGCAACT GCTATTTACT CTGCTCAGCA AGGTTTCCTT GCGGCATTGT GTGGCGCTGA CTATCTTGCG CCTTATGTGA ACCGTATTGA TGCGATGAAC GGAAACGGTG TAGAAGTGGT CGCAGACCTG CAATTGCTAC TGGATCAAAA CCAACTGCCT GCAAAAATTT TGGCAGCGAG TTTTAAGAAT ACCCAACAAG CGATGGAAGT GATGAAGTTA GGTATTGAAG CGATCACCTT ACCTGTCGAT GTGGCCGCAC AGATGTTTTC TCATCCAGCA GTTCAGCCGG CTGTCGATCA ATTTGATAAA GACTGGAAAT CCGCGTTTGG CAACAAACTT TCATTTGAAA GTTAA
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Protein sequence | MIELYLDTAD VAEVKRFNQC LPLKGVTTNP SILAKSKQGL NQTLAGMQEA LGGTPRFHAQ VVSTTVEGMV EEARQIHELP YDMVVKVPAT ETGLAAIKLM KKEGIQVLAT AIYSAQQGFL AALCGADYLA PYVNRIDAMN GNGVEVVADL QLLLDQNQLP AKILAASFKN TQQAMEVMKL GIEAITLPVD VAAQMFSHPA VQPAVDQFDK DWKSAFGNKL SFES
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