| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001103 |
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| Symbol | |
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| ID | 8559416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1263427 |
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| End bp | 1265880 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408774 |
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| Product | glycogen phosphorylase |
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| Protein accession | YP_003288253 |
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| Protein GI | 262396400 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCTA CTCAACAAAA ACAATTTGAC AAGAAGTCGT TCCAAGAAAG CGTAAAGAAA
CACCTATCTG TAACTTACGC TCACACGATT GAAAACGCAG ACAGCCGCGC TTGGTACCTA
GCAATGGGTC ATGCACTGGC TGAGTTCACT ACTTTAGATT TGCTTGCTAC TGAAGAAGAT
CCACGCATTA AAAGTGCGAA GAGCGTTAAC TACCTTTCTC TAGAATTCCT TATCGGTCGT
TTGACGGGTA ACAACCTAAT CAGCATGGGT CTGTACGAAC AAGTAACAGA AGCAATGGCT
GAACTGGGTT ACAACCTAAC TGACCTGCTA GAAGAAGAAC GTGACCCATC ACTGGGTAAC
GGTGGTCTTG GTCGTCTAGC GGCATGTTTC ATGGATTCAT GTGCGGCACA AGAATTCCCA
ACCGTCGGTT ACGGCTTGCA CTACGAATAC GGTTTGTTCA AACAGTCTTT CAAAGATGGT
CGCCAGCAAG AAGCACCTGA CGCATGGCGT GGTGTAGAAG GCTACCCTTG GGAAATTGCT
CGTCCAGAAC TTGCACAAGA GATCGGTTTC TACGGTCACG TTGAAGTGGT TAACGAGAAC
GGTAAAGAAG TTCGCAAATG GGTTCCTGGC ATGTCTGTAA GAGCAATGCC TTGGGATCTA
CCAATCGTAG GTTACGAATC AGACACGGTT TACCCGCTAC GTCTTTGGGA ATGTCAGGCA
ATTGCACCAT TCTCGCTAGC AAGTTTTAAC AACGGTGACT ACTTCGAAGC GCAGCACGCA
CTGATCGACG CGGGCAACAT CACTAAAGTG CTTTACCCGA ACGACAACCA CGAGAAAGGT
AAAACACTGC GTCTAATGCA ACAGTACTTC CACTCAGCTG CGTCTGTACG TGACATCCTA
CGTCGCCACG AAGCAGCTGG CTACTCGCTA GCGGATCTAC CGAAGCAAGA GACTATCCAG
CTTAACGATA CGCACCCAAC GATTGCGATT CCTGAGCTAA TGCGCATCCT GATGGACGAA
AAAGGTCTAA CTTGGGAAGC GGCTTGGGAA ATCAGCTCTC AAACATTCGC GTACACAAAC
CACACGCTAC TTCCAGAAGC ACTAGAGACA TGGCCAGAGT CGCTAATTCA GCACCTACTA
CCACGTCACA TGGAGATCAT TTACGAGATC AACCACCGCT TCCTACAAGA CGTACGTGCA
ATGTGGCCGG GTGATGTCGC GAAACAACAG AAGCTTTCTA TCATCGAAGA AGGTTTCCAC
CGCATGGTTC GCATGGCAAA CCTATGTGTA ATTGGCTCTT ACGCAGTAAA CGGTGTAGCG
GCACTTCACT CTGAATTGGT TAAGAAAGAC CTATTCCCAG AGTTCCACGA AATGTACCCA
ACACGTCTAC ACAACGTAAC GAACGGTATT ACGCCACGTC GTTGGTTGAA GTTCTGTAAC
CCAGGTCTTT CTAAGCTAAT CACAGAGAAA GTCGGTCCAG AATGGCCAGC GAAACTAGAG
CAACTAGAAG GCATCGCTAA GTACGCCACT GACGAGAAAT TCCAGAAAGA ATTCATGGCA
GTGAAGAAAG AGAACAAAGA ACGCCTAGCT AACTGGGTGA AAGAGAACAT GGGTATCGAA
CTCGATACTA ATGCGATCTT CGATGTTCAA ATCAAGCGTC TGCACGAGTA CAAGCGTCAG
CACTTAGACC TTCTACACGT ACTGTCTCTG TACCATCGCA TTATTAACGA ACCAGGCTTC
GAATGTGTGC CTCGCGTTGT GTTCTTCGCA GCGAAAGCGG CACCGGGTTA CCACCTAGCG
AAAGAAATCA TTTTCGCTAT TAACAAGATT GCTGAGAAAG TGAACAACGA CCCTCGCATC
GGCAACAAGC TGAAAGTGGT CTTCATTCCT GATTACCGTG TGAGCATGGC TGAAATTATT
ATTCCTGCGG CGGACGTATC ACAACAAATT TCACTTGCGG GTAAAGAAGC ATCAGGTACT
GGTAACATGA AGATGGCGCT TAACGGTGCC CTAACGATCG GTACGATGGA TGGTGCTAAC
GTTGAGATTC GTGAAGAAGT AGGCGATGAG AACATCTACA TCTTCGGTCT AGACGTTGAA
GGTGTGAAAG CGCTGAAAGC TCAAGGTTAC AACCCATTTG ATTACTACAA TGCGGATCAC
CTACTCAAAG CGTCTATGGA CCTACTACTG GGTGAAGAAT TCACTCCAGG TCAACCAGGC
TTACTGCGTG CAACGTACGA CAGCCTACTA GACGGCGGTG ACCCGTACTT ATGTCTTGCG
GACTTCGCAT CTTACGTGAA AGCGCACGAA GACATGAGCG AACAATACAA AGACCAAGCT
GGCTGGGCGA AGAAAGCCAT TCTGAATACC GCCCTTGTCG GCAAGTTCAC CTCAGATCGC
TCAATTCGCG ACTATGTGAA CAACATCTGG AAACTAAAAG CGGTTCACCG TTAA
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| Protein sequence | MKPTQQKQFD KKSFQESVKK HLSVTYAHTI ENADSRAWYL AMGHALAEFT TLDLLATEED
PRIKSAKSVN YLSLEFLIGR LTGNNLISMG LYEQVTEAMA ELGYNLTDLL EEERDPSLGN
GGLGRLAACF MDSCAAQEFP TVGYGLHYEY GLFKQSFKDG RQQEAPDAWR GVEGYPWEIA
RPELAQEIGF YGHVEVVNEN GKEVRKWVPG MSVRAMPWDL PIVGYESDTV YPLRLWECQA
IAPFSLASFN NGDYFEAQHA LIDAGNITKV LYPNDNHEKG KTLRLMQQYF HSAASVRDIL
RRHEAAGYSL ADLPKQETIQ LNDTHPTIAI PELMRILMDE KGLTWEAAWE ISSQTFAYTN
HTLLPEALET WPESLIQHLL PRHMEIIYEI NHRFLQDVRA MWPGDVAKQQ KLSIIEEGFH
RMVRMANLCV IGSYAVNGVA ALHSELVKKD LFPEFHEMYP TRLHNVTNGI TPRRWLKFCN
PGLSKLITEK VGPEWPAKLE QLEGIAKYAT DEKFQKEFMA VKKENKERLA NWVKENMGIE
LDTNAIFDVQ IKRLHEYKRQ HLDLLHVLSL YHRIINEPGF ECVPRVVFFA AKAAPGYHLA
KEIIFAINKI AEKVNNDPRI GNKLKVVFIP DYRVSMAEII IPAADVSQQI SLAGKEASGT
GNMKMALNGA LTIGTMDGAN VEIREEVGDE NIYIFGLDVE GVKALKAQGY NPFDYYNADH
LLKASMDLLL GEEFTPGQPG LLRATYDSLL DGGDPYLCLA DFASYVKAHE DMSEQYKDQA
GWAKKAILNT ALVGKFTSDR SIRDYVNNIW KLKAVHR
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