| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001090 |
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| Symbol | |
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| ID | 8559403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1246434 |
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| End bp | 1247630 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646408761 |
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| Product | fOG: TPR repeat protein SEL1 subfamily |
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| Protein accession | YP_003288240 |
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| Protein GI | 262396387 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAGTA TGGGCATTGC CATTGCGGCA ACTGGCCTTT CACTCGTCCT GATATTTGTG
TGGATGATCT CGTTGTCGAT GCGGAAACAG AGACTCGAGG CAGAGAGGAA AGCTCGCGAA
GCCTCTTATC GAAAGGCGAT GCAAAAAGCG CGAGAGCAAG AGCGTAAAGA GCGTGAGTTC
AAAGCAGAAA CCGGACATAT CCCCACCATT TTATTTCTAG CGAAAGAAGC CGAGAAGGAC
AACATTCGTC AAGCGCTGTA TTGGTATGAT AAAGCCGCTA AGTTGGACAA TGTGACGGGA
ATGTACGGTA TTGTTCGCTT GAGTGAGCGC ATGCGTGAAG ATGTGATTTT AAAAGAGCAG
GCAAACTTTT GGCGTACCGC CATTGCCGGA ATGGAAGGGG ATACCGAAGC GAAATTTGCG
ACAGGCAAAG CGTTGGTTTT TGGCCGCGGA ACGGAAAAAA ATATTCCCAA AGGTAACCAA
CTGATTGAAA CTGCAGCCGA AGAAGGCTGC ATTGATGCCA TGCTTTACAT GGGTGAATGG
CAACTTTCAC CAGACAATAG TGCAGGACGC AGTGCAGATG CGCTTTATTG GTTTATGAAA
GCGGCTGAAA AAGACAGTGC GGACGGAAAA ATCCAAGTTG GCTTATGTTA CCTAAATGGT
GTTGGTACAG AAAAAAGCAT GGTCAAAGGC TGCTATTGGC TTGAAAGAGC CGCAGAAGGT
GGCAGCGCCG AGGCGATGTA TCATGCTGGC GAAGCGTGGA AGGACAAAGG TAAAACAGGC
AATGCGATTG CTTATGTTTG GTTGTTTCTT GCTGCCAATA TGGGGTATCA GCCAGCGCGT
ACGTTGCGTG ACGAAGTGGC AACCAATATT GGTGTTGATG TCGTCGTTGG ATTGCAATCC
ATAGCGAAAC CGTTGCAAAG AAAGCTTGCG TCAGGGATGG TGAGAAAGCA TTCCATTATT
CGTGCGCTGA ACAAGGTGTA CAAACGCGAA GCGTATTTTC CTGCAGAGGA GGAGCTTAAC
GCGGTGCTGA GTGACGAAAA TAAAGACGAT GCTAACGCAT GGGATGAAGC ATCGGCGCCG
AACTTCCAGC CAGACATGAC CACAGCAACG ACGGAAGGGC AGACAACCAC ATCGTCTACC
GAAAAAAAGC TCTCTAAAGA GGCGCTCGAT TTCACGCAGA ATTTCCTTCA ACCATAA
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| Protein sequence | MSSMGIAIAA TGLSLVLIFV WMISLSMRKQ RLEAERKARE ASYRKAMQKA REQERKEREF
KAETGHIPTI LFLAKEAEKD NIRQALYWYD KAAKLDNVTG MYGIVRLSER MREDVILKEQ
ANFWRTAIAG MEGDTEAKFA TGKALVFGRG TEKNIPKGNQ LIETAAEEGC IDAMLYMGEW
QLSPDNSAGR SADALYWFMK AAEKDSADGK IQVGLCYLNG VGTEKSMVKG CYWLERAAEG
GSAEAMYHAG EAWKDKGKTG NAIAYVWLFL AANMGYQPAR TLRDEVATNI GVDVVVGLQS
IAKPLQRKLA SGMVRKHSII RALNKVYKRE AYFPAEEELN AVLSDENKDD ANAWDEASAP
NFQPDMTTAT TEGQTTTSST EKKLSKEALD FTQNFLQP
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