| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000989 |
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| Symbol | |
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| ID | 8559302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1119400 |
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| End bp | 1120332 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646408660 |
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| Product | oligopeptide transport ATP-binding protein OppF |
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| Protein accession | YP_003288139 |
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| Protein GI | 262396286 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCAGC CTATCATCCA AATGAAAAAC GTGATTAAAG AGTTCAGAGT AGGCGGTGGT
TTAGCGAAAG AGGAAACCTT CCGTGCGCTC CAAGGCGTGA GCTTTGATCT GTATGCAGGA
AAAACGCTGG CTTTGGTTGG AGAATCAGGC TGCGGTAAAA GTACGTGTGC TCGCTTGATC
ACTAAAGTCT ATCCGGCAAC AGAAGGCGAG ATCCTTTTCA ATGGCACTAA TATCAATGAG
ATTACGTCAC GCTCAGCGCT CCAAGAGTAT CGCAGTAAAG TACAAATGGT GTTTCAAGAT
CCGTTTGGCT CACTCAATCC AACTCATACC ATTCGCCATC ATCTCACACG CCCTTTAAAG
ATTCATAAGC AAATCAAAAG CGAACGTGAC ATTCCTGCCC GTTTGGAAGC GCTTTTAAAT
TTGGTGGAAC TACCTGAAGA GACATTAAAT AAGTTTCCTC ACGAGCTTAG TGGTGGACAA
CGTCAGCGAG TAAACTTAGC ACGTGCTCTC GCCGTCGGTT CGCAAATCAT TCTTGCGGAT
GAGCCAACAT CGATGCTGGA TGTCTCCATT CGCCTCGGGG TACTGAATCT AATGCAGCGC
ATGAAGCAAG AGCTAGGAAT CGGCTTTTTG TACATTACTC ATGATTTGGC GACCGCACAC
TACATCGCGG AAGAAACAGC TGTGATGTAC AAAGGGCAAA TCGTTGAATG GGGTGATACA
CACTCAATAC TGAAGAATCC GCAGCACCCG TACACCAAAC TATTGATTTC AGCCGTTCCC
GATCCAGATC TTCCTTTTGG TAACTTAGTG AAAAGTGAAC CAAACTATTC GATAGATGCC
GATGAAATTC GTAGTCGTAG CAGTATCATT GTCGACGAAT TTGATCAAAT AGGACCCAAT
CACTATGTAA AACAATGGAC TGAGGCTGCG TAA
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| Protein sequence | MNQPIIQMKN VIKEFRVGGG LAKEETFRAL QGVSFDLYAG KTLALVGESG CGKSTCARLI
TKVYPATEGE ILFNGTNINE ITSRSALQEY RSKVQMVFQD PFGSLNPTHT IRHHLTRPLK
IHKQIKSERD IPARLEALLN LVELPEETLN KFPHELSGGQ RQRVNLARAL AVGSQIILAD
EPTSMLDVSI RLGVLNLMQR MKQELGIGFL YITHDLATAH YIAEETAVMY KGQIVEWGDT
HSILKNPQHP YTKLLISAVP DPDLPFGNLV KSEPNYSIDA DEIRSRSSII VDEFDQIGPN
HYVKQWTEAA
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