| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000978 |
|---|
| Symbol | |
|---|
| ID | 8559291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1108480 |
|---|
| End bp | 1109748 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646408649 |
|---|
| Product | ABC-type transport system involved in lipoprotein release permease component |
|---|
| Protein accession | YP_003288128 |
|---|
| Protein GI | 262396275 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCAAGC TAATTCCTGT TTCCGTTCGC CTTGCTTGGT TGAACCTGCA ACGCAATCGC
CGTCGCAGTT TATTGTCGAT GCTGATCATT GCCATTGCGG TGTTTGCGTT AACCAGTGCG
GGTGGTTTTG GTCTGTACAC CTATGACAGT TTGAAAGAAT CGACAGCGCG TGACACGGGG
CATCTGACGT TAACCACGCC GGGTTACTTC GCCAAAGAAG AAGAGATGCC GCTGAGTAAC
GGTTTAACTC ACGCCGACGA CATTACCAAG CAATTGATTG GATTGAATGA AGTGCGAGGC
GTGCAGCCAC GAGTTGAGTT CAGCGGTTTG ATTTCCAACG GCAACAAGTC CTCGATCTTT
ATCGGCATTG GCGTCAACGA ACGCGAATTC GATATGAAAG GACCATTTTT GGATGTGCGC
GAAGGGCAAA CGCTGTCCAA CATTCATGCA TCGCGTTATG ACCCTGCAGA GCCAGAAGTG
ATGCTTGGCG TTGATTTAGC GAACAACCTA AGCGTGCATG TTGGCGACTG GATTACCTTG
CTGGCGACCA CAACCGACGG TGCATTGAAC GCGTATGACT TCAAAGTTCG TGGCATCTAT
TCAACCGGCG TGCCTGAGCT TGATAAACGC CAGCTGTACG TGCACATCAA CAGTGCGCAA
TCGTTGTTGG GCTCCGATAA AGTCAGTGCG TTATCAGTCT TCCTGTTCGA TACCAGTTTA
ACGAGCAAAG TCGAGCAACA AGTGGCTTCG GTTCTGAGTA AGCAAAAACA GAACCTTGGT
GCTCAAGATA TTGAGATTAC GCCTTGGCAA GAACGCGCGT TCTTCTATCT CAAAGTGAAA
GATTTGTACG ACCGTATCTT CGGCATCATG GGCGCAGTAA TGGCGTTGGT GGTCTTTGTC
GCGCTGTTCA ACACCATGAC CATGTCGGTC ACCGAGCGTA CACGTGAAAT CGGCACCTTG
TCAGCACTTG GTAGCTACCC TCGCGAAATC ATTGCTGGGT TCTTACGCGA AGCAGGCTTA
CTTGCCGTGA TTGGCAGCTT AATCGGCGCT TTGTTTACTG CGTTAGTTAC CGTCTTACTG
ATGGTCGTGG ATGTGCAAAT GCCGCCACCA CCAGGACGCA CAGAAGGTTA CCCATTGACG
ATTTACTTCT CTTGGGAGTT GGTGGCTGTC GCAGGATTTG CAGTATTGAT GATTTGTTTG
GTTGCGGCGT TTTTCTCGGC GCGCAAGGGG GTGAATAAGC CAATTACGGA GGCACTGATT
TATGTTTAA
|
|---|
| Protein sequence | MGKLIPVSVR LAWLNLQRNR RRSLLSMLII AIAVFALTSA GGFGLYTYDS LKESTARDTG
HLTLTTPGYF AKEEEMPLSN GLTHADDITK QLIGLNEVRG VQPRVEFSGL ISNGNKSSIF
IGIGVNEREF DMKGPFLDVR EGQTLSNIHA SRYDPAEPEV MLGVDLANNL SVHVGDWITL
LATTTDGALN AYDFKVRGIY STGVPELDKR QLYVHINSAQ SLLGSDKVSA LSVFLFDTSL
TSKVEQQVAS VLSKQKQNLG AQDIEITPWQ ERAFFYLKVK DLYDRIFGIM GAVMALVVFV
ALFNTMTMSV TERTREIGTL SALGSYPREI IAGFLREAGL LAVIGSLIGA LFTALVTVLL
MVVDVQMPPP PGRTEGYPLT IYFSWELVAV AGFAVLMICL VAAFFSARKG VNKPITEALI
YV
|
|---|
| |