Gene VEA_000848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000848 
Symbol 
ID8559154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp972583 
End bp973341 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content46% 
IMG OID646408513 
ProductTonB system biopolymer transport component 
Protein accessionYP_003287999 
Protein GI262396146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAA GTATCGCTCT GTTGATATCA TCGGTTTTGA TTCCCGCTCA CGCGGCGAAC 
TTAAACGATG CACAAGCTGT GCAGAGTAAA ACAAACCAGT CGTCGGCGGT AAGCCAAAAA 
CGTATTGATG CAAGCGCAGA AAAATCACTT ACTCTAGAAG CTGAAATTGA GCAGCTGCAA 
GAGGAAGTCG GTAACTTGAA GATTTATCGC GATCATCTTG CAAGCCTTGT TGAGAGCCAA 
AATCAAGAAG TTGATAGCTT GAACGAGCAA ATTGAGCAGA TTGCTCAAAC TCGTCAAGGT 
GTCGTGCCTT TGATGTATCA CATGCTTGAG GGCTTAAAAG TGCTCGTCGC TAACGACAAG 
CCTATACGCA AAGCGCAACG TGAGGAGCGA ATAGCAAAGC TGGATTCCAT GATGACGCGT 
GCAGACGTTG CGGATGCAGA GAAGTTTCGT CGTATTTTAG AAGCGTACCA AATTGAAATG 
GATTACGGCA CCAAGCTTGG CGTTTACCAA GGCAAGATTA ACCTGGGTGA CAATGAAGCT 
TTGGAGGCGG ACATTCTCTA TTTAGGGCGT TTGTCTTTGG TAGCACGTAG CTTATCTGGT 
GACATATTCT GGAGCTGGTC ACAGCAACAA CAAGCATGGC AACAAGTGGG TTCTGAGCAA 
AAATCAGAGC TAGATAAAGC GTTCGCTATG GCGAATAAAC AGATCGCGCC GAGTATGTTA 
ACTCTGCCAG TGTCGTTAAC CGCTGCGGAG GGCAAATAA
 
Protein sequence
MKSSIALLIS SVLIPAHAAN LNDAQAVQSK TNQSSAVSQK RIDASAEKSL TLEAEIEQLQ 
EEVGNLKIYR DHLASLVESQ NQEVDSLNEQ IEQIAQTRQG VVPLMYHMLE GLKVLVANDK 
PIRKAQREER IAKLDSMMTR ADVADAEKFR RILEAYQIEM DYGTKLGVYQ GKINLGDNEA 
LEADILYLGR LSLVARSLSG DIFWSWSQQQ QAWQQVGSEQ KSELDKAFAM ANKQIAPSML 
TLPVSLTAAE GK