Gene VEA_000796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000796 
Symbol 
ID8559101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp911851 
End bp913185 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content45% 
IMG OID646408460 
Productdeoxyribodipyrimidine photolyase single-strand-specific 
Protein accessionYP_003287947 
Protein GI262396094 
COG category[L] Replication, recombination and repair 
COG ID[COG0415] Deoxyribodipyrimidine photolyase 
TIGRFAM ID[TIGR02765] cryptochrome, DASH family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAAGA AAATAGGACT GTATTGGTTC ACTAATGACC TGCGTTTGCA TGACAACCCG 
CTGTTGATAG ACGCTTGTGC AGAAATGGAT GAGTTAATTT GTTTGTATTG TCGCCCCTCG
GTGACACCTT ACTTGCAGCA CTTTGCGCAG GAGACCTCTT TAGGGCGTGC GAAATTGCAG
TTTCTCGAGG CATCGCTTAA TGAACTTAAT CAATCTTTAG CTAAATTGGG GCAACGATTA
TGGACGGTTG AACTGACGCC CTATCAAGCG ATCAAATATG CCATCAGTCA TTTCGGCATC
ACTCATATTT ATGCTGATGC GTTTGCTGGT TCGGATGAGC AACAGGCACT AGAGCGTGCA
ATTAAAGGCA CTCCCCATGT GAACATCAAA CAGCAAGCGA TCCGCACTTT GTTGCGCGAA
GAACAGTTGC CATTTGAATT AAGGCAACTG CCTGCGACCT TCACGAAATT TAGAAAGCAG
GTCGAAGGTT TAGACCTCTC TCAACCTTAC GAGAGCGTTC ATGCTTTACC GCCAGTACCT
TCAGGTATGA ATTTTCCTAC CGCCACGACA TATTACTTTG ACACCAAACC AGTATTTGAT
GGCGGAGAAC TGAGCGGTCT TGAACATTGT CGACGCTATT TTGCTTCAAG TTTAGCGAGC
GAATATAAAC AGACTCGCAA TGAGCTCGAT GGGATGGAGT ATTCAACCAA ATTTTCACCT
TGGTTAGCTC ATGGTTGCGT CTCTCCTACA ATCATTTATG CCATGCTCAA ACAATATGAG
CAGAAGAACG GAGCAAATGA TTCAACCTAT TGGATCTATT TCGAGTTGTT GTGGCGGGAA
TACTTTTATT GGTACGCGAG AAAGTATCAA CAGAAGTTGT TTCGATTTGG CGGTATCGCC
AACCAGCCAC CACTGACCAG CTTTTATGCG CAACGCTTTA AGCAGTGGAA GAAAGGCGAG
ACACCTTTTC CAATCGTTAA CGCATGTATG CATCAGCTTA ATAAAACGGG TTATATGTCT
AACCGAGGGC GCCAACTGGT CGCGAGTTGT CTGGTTCATG AACTCGGACT CGACTGGCGC
TACGGTGCTG CTTATTTTGA AACTCAGTTG ATTGATTACG ATGTCGGCTC TAATTGGGGA
AACTGGCAGT ATTTAGCTGG TGTTGGCGCT GACCCACGTG GCTCACGTCA GTTTAATCTA
GAAAAGCAGA CACAAACTTA TGATCCAGAT TTTTCATTTA TCGACAAATG GCAGGGGAGA
TGCGTAGGCG TACATCTTGA TAGTGTCGAT ATGGTGGATT GGCCGATTGC GTCAAAAAAA
GAGAGCGGGA GATAA
 
Protein sequence
MDKKIGLYWF TNDLRLHDNP LLIDACAEMD ELICLYCRPS VTPYLQHFAQ ETSLGRAKLQ 
FLEASLNELN QSLAKLGQRL WTVELTPYQA IKYAISHFGI THIYADAFAG SDEQQALERA
IKGTPHVNIK QQAIRTLLRE EQLPFELRQL PATFTKFRKQ VEGLDLSQPY ESVHALPPVP
SGMNFPTATT YYFDTKPVFD GGELSGLEHC RRYFASSLAS EYKQTRNELD GMEYSTKFSP
WLAHGCVSPT IIYAMLKQYE QKNGANDSTY WIYFELLWRE YFYWYARKYQ QKLFRFGGIA
NQPPLTSFYA QRFKQWKKGE TPFPIVNACM HQLNKTGYMS NRGRQLVASC LVHELGLDWR
YGAAYFETQL IDYDVGSNWG NWQYLAGVGA DPRGSRQFNL EKQTQTYDPD FSFIDKWQGR
CVGVHLDSVD MVDWPIASKK ESGR