| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000752 |
|---|
| Symbol | |
|---|
| ID | 8559057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 865676 |
|---|
| End bp | 866506 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646408416 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003287903 |
|---|
| Protein GI | 262396050 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00374891 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATGAGT TACATAGCGT CCGATTGGTG GCAGATTCAC TCGGAAAGAC ATCAGGATCA
ATCAGCAAAA ACCTGACAAA AATGAAAGCG CAGCTCGATG ACCCTTTGTT CATTCAGACT
AAAAATGGCT TTGAACCGAC CGCTTTTGTC GAGGCGAACA TGCCACATTT TGAACAAATC
CTCACCAGTA TTGATTCCAT CAAACCACAG AGTTTTTCAC CCGCTAATTT TGACGGCTCG
ATCACTATTT ATGCGAACAC ATTGTTTTGG GATTACTTTG GTGACAAGTT TTACTTAGAA
TTACTAAAAC ACGCCCCAAA AGCAAAGTTC GCTTGTTTAC GTTGGGGGAG CGACGCGAAA
AAGCGATTAA CTGAGGGTGA AAACGCTATT GCGATTCATT ATTTTGATGA GGATCTTCCG
CAGTCAATTA TTCAAAACGA ACTAGGTCGA GGAAAAGCAG TATTTTTTGT TCGAGATGAG
CATCCCGCTC AACATTTCCA AGAGCTAGAA AACTACCCCT TTTTACTTTT CAAAACGCCG
GGATGGAACG ACTACCGATA CCCGTTGTTG GAAAGGCTCA ATCATATGGG GTTCAGAACC
ACACCTAAGG TAGAAATTGA ACATCCTGCG ATGATTCAAA AAGTGCTCCT ACAAACGGAT
CATTTTGGTA TAACCATGAG TGGACATGTG CCTAAGGGCT GCCGAAGTAT CGCGCTTCCT
GGCGGGTTAG AGCTTGATGT TCGCTACGTG ATGAGCTGTC GTCGATCACA ACAGCAAGCC
CCGATAAACC AGTGGTTATT CAATGTCATT AAAGATATCA CCCAGCCCTA A
|
|---|
| Protein sequence | MYELHSVRLV ADSLGKTSGS ISKNLTKMKA QLDDPLFIQT KNGFEPTAFV EANMPHFEQI
LTSIDSIKPQ SFSPANFDGS ITIYANTLFW DYFGDKFYLE LLKHAPKAKF ACLRWGSDAK
KRLTEGENAI AIHYFDEDLP QSIIQNELGR GKAVFFVRDE HPAQHFQELE NYPFLLFKTP
GWNDYRYPLL ERLNHMGFRT TPKVEIEHPA MIQKVLLQTD HFGITMSGHV PKGCRSIALP
GGLELDVRYV MSCRRSQQQA PINQWLFNVI KDITQP
|
|---|
| |