Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000709 |
Symbol | |
ID | 8559014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 821524 |
End bp | 823980 |
Gene Length | 2457 bp |
Protein Length | 818 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 646408373 |
Product | alpha-1,2-mannosidase |
Protein accession | YP_003287860 |
Protein GI | 262396007 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3537] Putative alpha-1,2-mannosidase |
TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACTAA AAAGAACCCT TATCTCTACC GCTATACTCG CTGCCATGTT TGGTCTTGCT GGTTGTAACA GTGATGACGA CAACAGCAAA TCTGGAACAC CATCCCTCGA CACCACACTA ACTCAATACG TCAATCCATT GATTGGTACA GGTGCAGATG GTCACACCTT CCCGGGGGCG ATTGTGCCTT ACGGTTTGGT ACAACTTTCT CCTGATACTG AAATGGAAGG CTGGGGCTCT GCCGCAGGTT ACTTCGACCA CGGCAAACTG ACTGAAATCC CAGTGTATGG TTTCTCCCAC ACTCACCTTT CTGGCACAGG CATTACCGAC CTTGGTGATA TCTTAGTTCT GCCTTTTACC AAAAAAGAAA ACGCCGTTTT CAACACGTTC GATAAAGACA ACGAAACCGC CGAAGCGGGT TACTACGCGG TTGAACTGAA CAAAGGCGAA ATCAAAGCTG AGCTAACTAC CACGCAACGT GTTGGCTTCC ACCGCTACAC CTTCAGAGAA GGCACCACGC CACACATCAA GTTCGATTTA GACCACACTC TCAACAAAGG TCACTTCAAC AACCGCCCCA TGAAGGGTGA TTTAGAGTTC ATCGACGCTT ACACCATTCG CGGTTTACGT AGCTCGAACG GTTGGGCGAA CAACCAACAC GTCTACTTCT ACGCCACCTT CAACCAACCT ATCGTCAAAG CCATTGCTCT AGTTGACGGC GCAGAAACGG AAATCGATGT AAACAACGAC AACATCGACG CAGTGAAAAC CATCGCTTAC CTAGAATTCG CACCATCATC AACACCGCTA GAAATCCAAG TAGGCTTGTC ACCAACAGGC ACAGAAGGTG CAGAGAAGAA CCTAGAAGCA GAAGCGAAAG ACGTGTCATT TGATACTGCG CGCGCTCAAG CCAACGACGC ATGGCACCAA GAGCTTAGCC GCATGATGGT ATCTGGCGGC ACAGAAGATC AAAAAGAAAT CTTCTACACC GCGCTCTACC ACGCTTCTAT CGCGCCAATG ATTTTCCAAG ATGTCGACGG TCAATACCCT GCGATGCGTA CTCGCATTCA AAAAGACGCG GGCGACACAC CAAACTACTC CGTGTACTCC ATGTGGGATA CCTTCCGCGC TGCGCATCCA CTGAAAACCA TCATCGACCC AGAACGTGCC GAAGAGTTTG CCAACGACCT GATTCGTAAA TACGAAGACG GTGGCATCTT GCCGAAATGG GAACTGCACA GCCACTACAC GGGCACGATG ATCGGCTTCC CTGCGGTTTC TATCATTGCT GACGCGATGG CAAAAGGCTT AGACATCGAC CCACAACTTG CCAAAGAAGC GGCTGAATTT ACGGTGCGCT ACCACGAGGC ATCTGAATTC CCAGATTGGA CGGAAGACAA CAACATCGGC GCAGCAAACG TTGTGCAAGT GAAGGTGTAC GAAGAAAACG GCTTTGTTCA TCACGGCTAT TGGAACAGTG CGTCTTACAC GCTTGAGTTT GCTTATGGCG ACTGGGCAAT GGCAGAAATC GCGCGCATGG CTGGCGATGT AAAACTGCAA GAAGAGTTTA TGACTCGTGC CGACAACTGG CTTAACCATT GGGATGCAGA AACTGGCTTC TTACGTCCAA AGAACCATCC GATGAGTTCA TCACCAAACA AACCGCCTTT GGAGTTCAAC CAACCGATTG ATGAAGAGCG TTTGGATGAG TGTGAAATGG TTGAGTGGCC AGAAGGCTCA GGCGTGATGA AAGAGAAATG CCCACTGCTA CCATTTGACC CTTACTACGT GGACGAGTTT GCCTACACCG AAGGGAACGC GTGGCAATGG AAGTTCCAAC CAATGCACGA TTTCAACCGT CTGAAACAAG AAATCTACCA AGCAGACTTG GCGCAAGGCA AAGACACCAC GCCAGAGAAA GCTTTCCGTG AAGATTTGGA CGAGCTATTT AATGCACGTT CTTCAAACAC AGGCGAAGAG CTACCAGACC TAACGGGTTA CATCGGTCAG TACATGCACG GTAACGAGCC ATCGCACCAC ATTCCTTACC TATACGCGCT AACGGATGAG CCATGGAAAG CGCAAGAGTA CCTAGACCGC ATCATGTCAG AGATGTACAC CAGCGAGCCA ACCGGCTTGA TTGGTAACGA AGACGTGGGT CAGATGAGCT CTTGGTACTT GATGTCGGCA ATGGGCTTCT ACCAAGTGAC GCCTGCGGAT CCGGTCTACA CCATCGGTCG TCCTATGTTT GATGAAATCA CCATTCCAGT GGAAGGCGGC GAGTTCACAG TCATCGCAGA CAACAACAGC CCACACAACA AGTACGTGAA GTCTGTAACC ATCAACGGCA AACCGCTGGA TGCCAACTTC ACCTTCAAAC ACAGCGAAAT CAAAGCGGGC GGCGAGCTTC ACTTCGTCAT GACGGGTGAC AAGCAAGAAG CGCTTCAAGC TCAGTAA
|
Protein sequence | MKLKRTLIST AILAAMFGLA GCNSDDDNSK SGTPSLDTTL TQYVNPLIGT GADGHTFPGA IVPYGLVQLS PDTEMEGWGS AAGYFDHGKL TEIPVYGFSH THLSGTGITD LGDILVLPFT KKENAVFNTF DKDNETAEAG YYAVELNKGE IKAELTTTQR VGFHRYTFRE GTTPHIKFDL DHTLNKGHFN NRPMKGDLEF IDAYTIRGLR SSNGWANNQH VYFYATFNQP IVKAIALVDG AETEIDVNND NIDAVKTIAY LEFAPSSTPL EIQVGLSPTG TEGAEKNLEA EAKDVSFDTA RAQANDAWHQ ELSRMMVSGG TEDQKEIFYT ALYHASIAPM IFQDVDGQYP AMRTRIQKDA GDTPNYSVYS MWDTFRAAHP LKTIIDPERA EEFANDLIRK YEDGGILPKW ELHSHYTGTM IGFPAVSIIA DAMAKGLDID PQLAKEAAEF TVRYHEASEF PDWTEDNNIG AANVVQVKVY EENGFVHHGY WNSASYTLEF AYGDWAMAEI ARMAGDVKLQ EEFMTRADNW LNHWDAETGF LRPKNHPMSS SPNKPPLEFN QPIDEERLDE CEMVEWPEGS GVMKEKCPLL PFDPYYVDEF AYTEGNAWQW KFQPMHDFNR LKQEIYQADL AQGKDTTPEK AFREDLDELF NARSSNTGEE LPDLTGYIGQ YMHGNEPSHH IPYLYALTDE PWKAQEYLDR IMSEMYTSEP TGLIGNEDVG QMSSWYLMSA MGFYQVTPAD PVYTIGRPMF DEITIPVEGG EFTVIADNNS PHNKYVKSVT INGKPLDANF TFKHSEIKAG GELHFVMTGD KQEALQAQ
|
| |