Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000678 |
Symbol | |
ID | 8558983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 787685 |
End bp | 788689 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 646408342 |
Product | EBNA-1 nuclear protein |
Protein accession | YP_003287829 |
Protein GI | 262395976 |
COG category | [S] Function unknown |
COG ID | [COG3367] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTG CTCAACCTTA CCTACTCTTT CTTGGCGATG TAACCGATCC ACTCGCAGCA AAAACCGCGC GTGGCATTTA CCAATGGCGA CCTGAGATTT GTCTTGGCCA AATCCGCCTG ACGCCAGAAA CCGTATCGCT TGGTTTAACC GACATGACAC TACAACAAGC GCAGCAGCAA GGAGCAAAAA CGCTGGTACT TGGCACAGCA AACCCGGGGG GAGTCATTCC CGAAGCTTGG CAAGCAACCT TACTTGAAGC GGCAGAAATG GGATTTGAAA TTGCATCGGG CATGCACCAA CGTTTGGCGG AATTTGCTCC TCTTGCCGAT CTAGAACAAC GCGGATTAAC CAAACTGAAT GATGTTCGCC ATTATGATGC CCCGCTCAAG GTCGGCAATG GCAAAGCTCG CGCAGGCAAG CGAGTACTTA CTGTAGGAAC AGATTGCTCC GTTGGCAAAA TGTACTCTGC CCTCGCCATT GAACACGCAT TAAAGCGTAA AAACTGTCGC GCAGAGTTCA AAGCAACAGG TCAAACGGGA ATTCTCATCG CAGGCAGTGG CATTTCAATT GATGCCGTAG TTGCCGATTT TATCTCCGGC GCAGTAGAAG CGATCAGCCC CGACTTCACT GACCACGATT GGGACATCAT CGAAGGGCAA GGTTCGTTAT TTAACCCTTC GTTTGCTGGC GTAAGTTTGG GCTTACTTCA CGGCGCACAA GCGGACGCTC TGGTACTGTG CCATGAGATT GGTCGCCCGC ACATCCGCAA CTTACCACAT GCGAGCTTGC CAACCATTGA ACAAACGATA GAAGCGAATC TGGCCGCTGC TCGCCTAACA AATCCAAACG CTCAATTAGT GGGTATTTGC TTAAACACTT CGGCGATCAG CGAAGAAGAT GCAGCCCAGT TATTCCAGGA TTGGAGCGAC AAATACCAAG TGCCCGTCAC CGACCCTGTG CGTTTTGGCG TTGATGCGGT TGCAGACTGG CTTCTTACGA TTTAG
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Protein sequence | MQIAQPYLLF LGDVTDPLAA KTARGIYQWR PEICLGQIRL TPETVSLGLT DMTLQQAQQQ GAKTLVLGTA NPGGVIPEAW QATLLEAAEM GFEIASGMHQ RLAEFAPLAD LEQRGLTKLN DVRHYDAPLK VGNGKARAGK RVLTVGTDCS VGKMYSALAI EHALKRKNCR AEFKATGQTG ILIAGSGISI DAVVADFISG AVEAISPDFT DHDWDIIEGQ GSLFNPSFAG VSLGLLHGAQ ADALVLCHEI GRPHIRNLPH ASLPTIEQTI EANLAAARLT NPNAQLVGIC LNTSAISEED AAQLFQDWSD KYQVPVTDPV RFGVDAVADW LLTI
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