Gene VEA_000678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_000678 
Symbol 
ID8558983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp787685 
End bp788689 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content51% 
IMG OID646408342 
ProductEBNA-1 nuclear protein 
Protein accessionYP_003287829 
Protein GI262395976 
COG category[S] Function unknown 
COG ID[COG3367] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTG CTCAACCTTA CCTACTCTTT CTTGGCGATG TAACCGATCC ACTCGCAGCA 
AAAACCGCGC GTGGCATTTA CCAATGGCGA CCTGAGATTT GTCTTGGCCA AATCCGCCTG
ACGCCAGAAA CCGTATCGCT TGGTTTAACC GACATGACAC TACAACAAGC GCAGCAGCAA
GGAGCAAAAA CGCTGGTACT TGGCACAGCA AACCCGGGGG GAGTCATTCC CGAAGCTTGG
CAAGCAACCT TACTTGAAGC GGCAGAAATG GGATTTGAAA TTGCATCGGG CATGCACCAA
CGTTTGGCGG AATTTGCTCC TCTTGCCGAT CTAGAACAAC GCGGATTAAC CAAACTGAAT
GATGTTCGCC ATTATGATGC CCCGCTCAAG GTCGGCAATG GCAAAGCTCG CGCAGGCAAG
CGAGTACTTA CTGTAGGAAC AGATTGCTCC GTTGGCAAAA TGTACTCTGC CCTCGCCATT
GAACACGCAT TAAAGCGTAA AAACTGTCGC GCAGAGTTCA AAGCAACAGG TCAAACGGGA
ATTCTCATCG CAGGCAGTGG CATTTCAATT GATGCCGTAG TTGCCGATTT TATCTCCGGC
GCAGTAGAAG CGATCAGCCC CGACTTCACT GACCACGATT GGGACATCAT CGAAGGGCAA
GGTTCGTTAT TTAACCCTTC GTTTGCTGGC GTAAGTTTGG GCTTACTTCA CGGCGCACAA
GCGGACGCTC TGGTACTGTG CCATGAGATT GGTCGCCCGC ACATCCGCAA CTTACCACAT
GCGAGCTTGC CAACCATTGA ACAAACGATA GAAGCGAATC TGGCCGCTGC TCGCCTAACA
AATCCAAACG CTCAATTAGT GGGTATTTGC TTAAACACTT CGGCGATCAG CGAAGAAGAT
GCAGCCCAGT TATTCCAGGA TTGGAGCGAC AAATACCAAG TGCCCGTCAC CGACCCTGTG
CGTTTTGGCG TTGATGCGGT TGCAGACTGG CTTCTTACGA TTTAG
 
Protein sequence
MQIAQPYLLF LGDVTDPLAA KTARGIYQWR PEICLGQIRL TPETVSLGLT DMTLQQAQQQ 
GAKTLVLGTA NPGGVIPEAW QATLLEAAEM GFEIASGMHQ RLAEFAPLAD LEQRGLTKLN
DVRHYDAPLK VGNGKARAGK RVLTVGTDCS VGKMYSALAI EHALKRKNCR AEFKATGQTG
ILIAGSGISI DAVVADFISG AVEAISPDFT DHDWDIIEGQ GSLFNPSFAG VSLGLLHGAQ
ADALVLCHEI GRPHIRNLPH ASLPTIEQTI EANLAAARLT NPNAQLVGIC LNTSAISEED
AAQLFQDWSD KYQVPVTDPV RFGVDAVADW LLTI