| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000656 |
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| Symbol | |
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| ID | 8558961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 761830 |
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| End bp | 763332 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646408320 |
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| Product | putative outer membrane protein |
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| Protein accession | YP_003287807 |
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| Protein GI | 262395954 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAT TCATTCTAAC GCCTGTCGTT CTAGCCCTAA GTTTAGCGGG CTGTGCAGTG
GGCCCCGACT ACCAAGCACC GACCACCAGC ATGGCAGAAA CCTACTTGAA CGCCGAAAAT
GCAGGGTTGA GTACCGATTC ACAACCCGTT GAGTTTTGGT GGACTAAGTT TCACGATCCG
GTGTTGAATC AAATGGTTCA AGACATACAG AGCCAAAACA TTCCGCTGAA AGTGGCGGCC
GAACGGGTGA AAATGGCCAA CAACTATAAA ACCATGGTGG AGTCATTCAA GGTGCCGACA
ATTAATCTCG GTGCGGGTTA CATGAACTAT CAGTTCAGTA AAAATGACTC TTCACTCGGT
CCGATATTGA ATCCACTCAG TGATTCCGTG TCGGGTCTGC CACCTCAAAT TGGTAACATC
ACCCTAATGG ATAATCAGCA CGATGGCGTA TTTGCAGGCG CGAGTATCGC TTGGGAAGTT
GATCTGTTTG GGCGCATTGA CCGCCAAGCG AACGCGGCGC ATATTCGTCT CGAACAAGCT
CAGATTTATC AAAGCGGCTT GAACACAGTG ATCACGGCGG ATTTGATTCA CAACTACTTG
CAATACCAAG GTGCAAGCGA GCGCCTTGAG TTGGCAAAGT CGAACTTAGA AGATCAACGA
CTTACACTCG ACCTCGTCGA GAAAGTCGTG CGCAGCGGCT ACGGTTCTGA TCTCGATTTA
GCCCAAGCAA AGGCCACGCT TGCGGCGATG GAATCGCTCG TTCCGCAGTT AGAAATTGCA
CAACAAGCGC ACAAACATCG TTTAGCAGTA TTGCTTGGTG AGCCGCTAAC GCAAGTCGAA
ATCCGTCTGT CTAAGCAGCA TAGTGTACCT GTCATGCAAG ACATGGTGCC GGTCGGTTTA
CCTTCCGATC TGTTGAAACG TCGTACCGAT ATCCGCTTAG CAGAGCGCGA AATGGCCGCG
CTCAATGAAG AGTTAGCAGC AAGTGTTGCT GATCAATATC CGAAGTTCTT TTTGACAGGC
GCTCCGGGGT TGTCGGCGTC AAGCTTTGAC GATCTTTTCA GTAGCGATTC TTTCGGTTGG
ATGGGCGCGG CAGGCGTAAG CTGGAACTTG TTCGATGGGG GGCGTGGGGA GGCGATTGAA
GCCATCAACC AAGCGCGTTT TGATTCGGCG ACATTGTCTT ATCAACATAC GGTCGAGGCA
GCTTTGGCAG AAACCGAATC CACGCTGTTT ACTTATGGTC GCAGCCAAGA AAATCAGCGC
CGAATCGGTG ATGCATTGAA AGCCACCAAT AACGCCGTCA ACAAAGCCAA GTCACTGTAC
CGAGCAGGCT TGATTGATCA CTTATCGGTT TTAGATGCGC AACGTCAGCA ACGCATGATG
CAAGATCAGC AAGTCGCGGC AAAGTTACAA ACCGCACACG CTACGATTGC GCTCTACAAA
TCGCTTGGTG GTGATTGGAC GCTACAACCA GAAGCACAAC CCGACACGAA TGCCAAAGGT
TAG
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| Protein sequence | MKKFILTPVV LALSLAGCAV GPDYQAPTTS MAETYLNAEN AGLSTDSQPV EFWWTKFHDP
VLNQMVQDIQ SQNIPLKVAA ERVKMANNYK TMVESFKVPT INLGAGYMNY QFSKNDSSLG
PILNPLSDSV SGLPPQIGNI TLMDNQHDGV FAGASIAWEV DLFGRIDRQA NAAHIRLEQA
QIYQSGLNTV ITADLIHNYL QYQGASERLE LAKSNLEDQR LTLDLVEKVV RSGYGSDLDL
AQAKATLAAM ESLVPQLEIA QQAHKHRLAV LLGEPLTQVE IRLSKQHSVP VMQDMVPVGL
PSDLLKRRTD IRLAEREMAA LNEELAASVA DQYPKFFLTG APGLSASSFD DLFSSDSFGW
MGAAGVSWNL FDGGRGEAIE AINQARFDSA TLSYQHTVEA ALAETESTLF TYGRSQENQR
RIGDALKATN NAVNKAKSLY RAGLIDHLSV LDAQRQQRMM QDQQVAAKLQ TAHATIALYK
SLGGDWTLQP EAQPDTNAKG
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