| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000654 |
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| Symbol | |
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| ID | 8558959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 757678 |
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| End bp | 758760 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408318 |
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| Product | putative efflux protein |
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| Protein accession | YP_003287805 |
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| Protein GI | 262395952 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATC AAATTAAAAC CGCCGCGCTG AGCACTATCG CGCTCTCTCT ACTCGGCTGT
AATCAAACTC AACCTCAGGT TGAGGAGCCT AGCGCATCCA GACCCGTTCA AGTGATTGAA
GTCAACGAAA GGAATGAAGA ACTCAACAAA TCATTCAGCG GGATCGTAAA AGCAAAAGAA
ACCGCCTCAC TCTCTTTTCG TGTACCCGGC ACCGTGGAAA GCGTGTTCGT AAATAAAGGC
AGCTTGGTAG AAAAAGGCCA AGTCATTGCC ATGCTGGACA AGCACGACTA CCAAGTCTCA
CTAGAAGAAT TACAAGCACG CATGTTAGAA GCACAATCAG CCCACAAACT TGCGAAAGCT
GAGTTAAAGC GCGTAAAACA AGCGACTTCT GATGATGCCA TTGCCAGCGT AAACTTAGAC
CGAGCCATCA GCAGTTACGA ACGTAGCCTC TCTGCCGTCA AAGTGGTTGA GAAAAACATC
CAACGTGCAA AAGATGCCCT ACGTTACACC ACTCTACGTG CACCATTCAC TGGCATTGTT
GCCGACGTTT CTGTTGATCC ACATGAACAA ACCTTGCCGG GCGGCAGTGT TGTGTCAATT
CAGCAAGAAG GCAGCTGGGA AGTGGACATC GACGTGCCAG AAAATATGAT TGCGCAATTC
GCACTAGGTC AGCCAGCATC ATTGACTTGG TATGATTCGG AACAATCCTA CCGAGCAACC
GTGTCAGAAA TCGCGCCGAA AAAGCACCTG CTCAAACAAA CCTATACCGT CACGCTAGAC
ATCGATTCGA TTTCCAGTGC GCTATTCAAC GGTAAAGCAG TCACGGTTAA TACCGCGCTC
AACACCAGTC ACTCAAGCCA TTGCTTTCCT TACTCTGCAA TTTTGGGGGA GAAACAAACT
CTGCACGTGA ATGTGGTTCG TGATGCGGTT ATTCATTCAG AGCCGGTCAA TCTTGACTCT
ATCGACGCAT ACCAAGCGTG TGTGACCGGA AGTTTTGAGC AAGGCGATTA CGTGGTGATC
AGCGGTAGCC ATTATCTGAG CGAGGGCGAT GCCGCCCCAA ACCTGACCAT CAAGACGTTG
TAG
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| Protein sequence | MNHQIKTAAL STIALSLLGC NQTQPQVEEP SASRPVQVIE VNERNEELNK SFSGIVKAKE
TASLSFRVPG TVESVFVNKG SLVEKGQVIA MLDKHDYQVS LEELQARMLE AQSAHKLAKA
ELKRVKQATS DDAIASVNLD RAISSYERSL SAVKVVEKNI QRAKDALRYT TLRAPFTGIV
ADVSVDPHEQ TLPGGSVVSI QQEGSWEVDI DVPENMIAQF ALGQPASLTW YDSEQSYRAT
VSEIAPKKHL LKQTYTVTLD IDSISSALFN GKAVTVNTAL NTSHSSHCFP YSAILGEKQT
LHVNVVRDAV IHSEPVNLDS IDAYQACVTG SFEQGDYVVI SGSHYLSEGD AAPNLTIKTL
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