| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000629 |
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| Symbol | |
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| ID | 8558934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 730048 |
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| End bp | 731325 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408293 |
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| Product | TRAP-type C4-dicarboxylate transport system large permease component |
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| Protein accession | YP_003287780 |
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| Protein GI | 262395927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACCG CTCTTGTAGC AACGATGATC ACGTTGTTGG CTTTTGGATT TCCGATGTTG
GTACCGCTAT TAGCGGCGAC CATGTTGGGA TTTATTGTTT TTCTTGGCTT GGGGCCAGAT
TTTATGATCC AGCAAATGCT TGCTGGCATC AAACCCGCTG CGTTGATCGC TGTGCCTATG
TTTATTCTCG CGGCAGAAAT TATAACCCGA GGCGTGGCAG CAACGCGCTT GCTAGATGTC
GCAATGGCGT TTGTTGGGCA CGTTCGTGGC GGTCTGGCGA TCACCTCATC GCTTAGCTGT
GCGATGTTTG GTGCGGTATC GGGGTCTACA CAAGCCACCG TTGTTTCTGT TGGCTCTATT
ATGCGACCGA AAATGTTGGA GTATGGTTAC AAAGACAGTT TTGCTCTGGC TTTGATTATT
AACGCCTCTG ACTTAGCGCT CCTTATTCCA CCGAGTATCG GTATGATCAT CTATGGTGTG
GTGTCTGGAA CATCGGTTGC TGAGCTGTTT ATTGCTGGTA TTGGACCGGC GATCGTGATT
TTATTGATGT TTTCTGCCTA CTGTTATTTT TATGCAGGCA AAAGCTCTGT AGAAAATGCC
CCGCGAGCCA GCTGGAAAGA GCGTTGGACC ACAATACGTA AAGCGGTTTT ACCATTTGGT
TTTCCGATCA TTACTGTTGG CGGTATTTAT GCTGGAGTAT TTAGCCCTAC CGAAGCGGCG
TCGGTTTCGG TGTTGTACGC TGTGTTATTA GAAATGGTTA TCTTCCGTAA AGTGAAATGG
AAGGAGCTTG GCGAAATCGC GCTTTCTACG GGCATGGTTA CCGCGGTGGT ATTTATCTTA
GTCGCAGCAG GGGCTGCTTT TTCTTGGGTA ATTTCATTTG CCCAGATCCC GCAAGAATTG
TTGGGCATGA TCGGGATTAA TGATCTTTCG CAGACCGAGT TACTGGTCGT TATTTCAATT
GCGTTCTTTA TTGGTTGTAT GTTCGTTGAT CCAATCGTAG TGATGCTGAT TTTGATCCCT
ATCTTTGCAC CTGTGATTAA GTCCTCTGGC ATTGACCCAG TACTGGTCGG CACCATCGTG
ACCTTGCAAG CTGCGATAGG TTCTGCAACA CCACCATTTG GCTGCGACAT CTTTACCGCA
ATTGCCGTGT TTAAACGCCC TTATGTAGAA GTGATTCGCG GCACGCCACC GTTTGTGTTC
ATCTTGCTTT TGGTCTCTGT GATGCTGATT TTCTTCCCTT CGATTTCACT TTTCTTACGT
GATTTAGCGT TTCGATAG
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| Protein sequence | MTTALVATMI TLLAFGFPML VPLLAATMLG FIVFLGLGPD FMIQQMLAGI KPAALIAVPM
FILAAEIITR GVAATRLLDV AMAFVGHVRG GLAITSSLSC AMFGAVSGST QATVVSVGSI
MRPKMLEYGY KDSFALALII NASDLALLIP PSIGMIIYGV VSGTSVAELF IAGIGPAIVI
LLMFSAYCYF YAGKSSVENA PRASWKERWT TIRKAVLPFG FPIITVGGIY AGVFSPTEAA
SVSVLYAVLL EMVIFRKVKW KELGEIALST GMVTAVVFIL VAAGAAFSWV ISFAQIPQEL
LGMIGINDLS QTELLVVISI AFFIGCMFVD PIVVMLILIP IFAPVIKSSG IDPVLVGTIV
TLQAAIGSAT PPFGCDIFTA IAVFKRPYVE VIRGTPPFVF ILLLVSVMLI FFPSISLFLR
DLAFR
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