| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_000599 |
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| Symbol | |
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| ID | 8558904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 696344 |
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| End bp | 697783 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646408263 |
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| Product | phosphotransferase system sucrose-specific IIBC component |
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| Protein accession | YP_003287750 |
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| Protein GI | 262395897 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00852] PTS system, maltose and glucose-specific subfamily, IIC component
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01996] PTS system, sucrose-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000683079 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTATC CGGCAGTAGC AAAAGAGTTG TTAACTCTAT TAGGTGGTAA AAGCAACATC
ACCGCACTTG CACATTGTGC GACACGCTTA CGCCTTGCCG TTGCAGATGA GCAAAAAATA
GATGAACAAG CGATTGATAA CCTTGAAGGG GTAAAAGGGC AGTTCAAAGT TGCGGGTCAG
TACCAAATCA TTTTTGGATC AGGCATCGTA AACCAAGTTT ATGCAGAAAT GGCGAAGTTG
ACGGGGATGA GTGAAATGTC CACCAACGAC GTTGCGTCTG CTGGCGCAGA GAAACAAAAC
ATCGTTCAGC GCGCGGTGAA AGGGCTGTCT GATATTTTCG TCCCAATCAT TCCAGCAATC
GTCGCTGGCG GTTTGTTGAT GGGTATTTAC AACCTACTGA CTGCCCAAGG CTTGTTTATT
GATGGTAAAT CCTTGATTGA GGCCAATCCA GGACTGACAG ACTTGGCGAA CATGATCAAC
ACGTTTGCAA ACGCGCCGTT TGTTTACCTG CCTATTCTGC TGGCATTTTC AGCCAGCAAG
AAGTTTGGCG GCAACCCATA TTTAGGGGCA GCGCTAGGTA TGTTGATGGT TCACCCTGAC
TTGCTGAATG GTTGGGGATT CGGCGGCGCA TCTGTGTCTG GCAACATTCC GGTTTGGAAT
ATTCTTGGTT TTGAAATCCA AAAAGTGGGT TACCAAGGTT CAGTGTTACC GGTTTTGGTA
TCGGCATTCA TTCTTGCGAA GGTTGAGCTA GGCTTACGTA AAGTCATACC TTCTGTTTTA
GACAACCTTT TAACGCCATT ACTGGCGATT TTCATAGCGG GTTTGCTGAC GTTTACTGTC
GTCGGTCCGT TCACGCGTGA TATCGGTTTC CTATTGGGTG ATGGTCTGAA CTGGCTATAC
AACACAGCTG GCTTTGTTGG TGGTGCGGTA TTTGGTCTTA TCTATGCTCC GTTTGTTATT
ACCGGTATGC ATCACAGCTT CATTGCGATT GAAACGCAAC TTCTTGCGGA TATTGCGACG
ACAGGTGGCA CCTTTATCTT TCCTATTGCG GCGATGTCTA ACGTTTCTCA AGGTGCTGCA
GCGTTGGCGG TGGGCATAAT GAGTAAAGAT AAGAAGATGA AAGGTATTGC GATTCCATCG
GGTGTCACGG GTTTGCTGGG TATTACAGAA CCAGCCATGT TTGGTGTTAA CTTAAAACTA
CGTTACCCAT TTATCGCGGC AGTTTGCGCT GCGGCGTTAT CAAGTGCGTT CATTACAATG
TTTAATGTGA AAGCTCAGGC ATTAGGGGCA GCTGGTCTTC CAGGCATCAT TTCCATCACG
CCAGATAAGA TTGGTTACTA CATCGCGGGT ATGGTGATCG CGTTCTTGAC CGCATTTGTT
CTCACCATTG TTCTTGGTAT GCGTGACCGC GCTAAAGTCG GTAAAAAAGC AGCGGCTTAA
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| Protein sequence | MNYPAVAKEL LTLLGGKSNI TALAHCATRL RLAVADEQKI DEQAIDNLEG VKGQFKVAGQ
YQIIFGSGIV NQVYAEMAKL TGMSEMSTND VASAGAEKQN IVQRAVKGLS DIFVPIIPAI
VAGGLLMGIY NLLTAQGLFI DGKSLIEANP GLTDLANMIN TFANAPFVYL PILLAFSASK
KFGGNPYLGA ALGMLMVHPD LLNGWGFGGA SVSGNIPVWN ILGFEIQKVG YQGSVLPVLV
SAFILAKVEL GLRKVIPSVL DNLLTPLLAI FIAGLLTFTV VGPFTRDIGF LLGDGLNWLY
NTAGFVGGAV FGLIYAPFVI TGMHHSFIAI ETQLLADIAT TGGTFIFPIA AMSNVSQGAA
ALAVGIMSKD KKMKGIAIPS GVTGLLGITE PAMFGVNLKL RYPFIAAVCA AALSSAFITM
FNVKAQALGA AGLPGIISIT PDKIGYYIAG MVIAFLTAFV LTIVLGMRDR AKVGKKAAA
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