Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_000544 |
Symbol | |
ID | 8558849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 642915 |
End bp | 645401 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646408208 |
Product | hypothetical protein |
Protein accession | YP_003287695 |
Protein GI | 262395842 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATATCCC AAGCCTCGCA TTTTATATAC TCCATAGAGA AAGCACGCCG CCAGCCTACG CTTCAAGCAT CAGCCGCACT TAATATAGAA GAACAAGACG GTGTTATTTC TTCCATGCAT CAAAAATTCG TCAGTAACCC CAATACCGCT GAATATGCTG ATGAGCTGAA AGAGGCCATG CTAGGGGTAT TATCAGGTAG GTTGGACGAG ATGGATGACC TTGGCGATTG GGCATTTCAA CTGCTTCAAA ATATGTCGCG CTCTTTGCTA CAAAATCATC AGTGGTATGG CAGTGAGGAC GGTATTCGAA TGCAGAATTT TATTGCTTAC CTTGCTCAGC TGTCTTTTTG GACACAGAAA GAAGCCTGGT TGACACATCG CCTAGTTCAA GATCCTAAGA GTCGGTTGAG TCAGAGTCTG TTTTTTCAGG CTATTGATCG ACAGCAGCAA AATTTGGATG CGTTTTTAAA TTTAGGAGGG TCATACGATC AAGTTGATAA ACTGCTAGGC TTGTTTACGT CGCCCAGATA TCAGAGAAAT TTGGCATCTC GTGGGCGATT AATGTCAGGG GACATGTCAC GTAGTGACTA TGAAGCGTAT TTGAGAGAAC TCGATTTCCG TGTGCAACGC TTGCAAGTAC TCATTGATGG GTTCACGAAA CAAACAGAGC AGTCGCTCCT AACACAAGTT CATGAACAAA AGACCAATAT TGCGATGATT ACCTCTGGCG TTATTTTGGT TATCGTCATG CTTTGCTGGC TTGGCTTTGG CACTTGGTTT CGGGTTAATA GCAAACTAGA TGCGATTATT CATACCTTAA CGGCGCTGAT CAACGATGAA GAGAAACAGA CGAAAGTCAA AGTCGATGGC AGTGATGAAC TGACGATTTT CGCTCAGCAA GTGAATCGAG TGGTTGAAGA AAAGCAGAGA CAAACAGACG AAATACTCCA TGCTAAAGAG TCAGCAGTGT CTGCTAATCG CGCTAAATCA GTATTTCTTG CCAACATGTC GCATGAAATA CGCACCCCCC TAAATGGTAT TATGGGCATG ACGGAGATAC TCTCTCAAAG CGAGTTATCT TCCCATCAAC AAGAAGTCGT TGATGACATT GACTCTTCAT CCCAAACATT ACTTACCTTG CTTAACGATA TTTTGGATCT TTCTAAAATC GAATCTGGTC GACTGGAGTT GTCGCTAGTC GAGGCCGATA TCCGAGAGGT GGTGTACCAG TCGATGGTTT TATTTCAATC CAAAGCCACA TCTAAACAGC TAGAGCTGGG GATTAACTTA GCTGAAAACA TTCCAACTCG AGTGATGGTT GATGATCATC GAATCAAGCA GGTAATCACG AATCTGGTAT CGAATGCGGT CAAGTTTACC GAAAGCGGCC ATATACGTGT TGATGTCAGT TATGACGAGT TATCTGAGAA AGAGTGCGGA GTGCTGATGT TTAAAGTCGA AGATACCGGG ATAGGCATTG AACAAGATAA GTTAACGACG ATTTTTGAAC CCTTTACTCA GGAAGATGAA GGGGTGTCGA GGCAGTTCGG CGGAACGGGA CTGGGATTGG CAATTTGTCG TCAACTGGTA TCCATGATGG GAGGGCAGCT TATAGCGACA TCCACAAAAG GAGTGGGCAC ATGCTTTGAA TTCTCTATTG AGGTTGACGT TATTCCGGTG TTTGGCTGGC GCTCGGACGT GATAAATAAA GGGCTCTTGA TCTGCACAAA TTACGATTAC GCTGATCAAC TTTTGAAAGA GTGTCGATTA GCAAAAATCA ATCTCTTTGG TGCGAATAAT GTTAATGAAG TAAAAGCAAT AAACGATGAC TTTGATGTCA TATTTCTGTG CCATAGAGAC GACTCCAATA CGGATGAAGC CTTAGATGAG TTGTCACTCA AGTATGATCT TCGTCGTGTG ATTATTTGTC AGCATCATCT ATCCACTCCC TACGACAATG CAGAAAGAGT ACATGCTGTG CTCACATTGC CTTTTCTTGG CAATCGATTT AAGCATGTCA TTGACGATTT AGCGAAGGTA GAAAAAACCA TTTCAAGTGA CGCTGTCACC AATGGTATTC CAAAGTCTGA ATATCGAACG TCGCGCTCTC ACAGGAGGAT CTTAATCGCG GAGGATAATT TGATGAATCA GAAAATAGCG AGTTTCTTTC TGGATAAAGC AGGATATGAC TATTTGATAA CAAGCAATGG ACAAGAAGCG TTGGAAGCCA TCACAAAGGG AGAAGAATTC GATGCAATTT TAATGGATTG TATGATGCCG GTGATGGATG GACTGACCGC GACGAAAGAA ATTCGTCGTT GGGAAAAGAA AGCCGGGCGT GAGAAAACGA CCATTATTGC GCTCACCGCG AGTGTTTTGG AAGAAGACAT TCACAACTGT TTTGCTGCAG GTATGGATGC TTATTTACCT AAGCCTTATA AATCGAATCA GCTATTTGAG CTCTTCAATG AATTAAAACT CGCCTAA
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Protein sequence | MISQASHFIY SIEKARRQPT LQASAALNIE EQDGVISSMH QKFVSNPNTA EYADELKEAM LGVLSGRLDE MDDLGDWAFQ LLQNMSRSLL QNHQWYGSED GIRMQNFIAY LAQLSFWTQK EAWLTHRLVQ DPKSRLSQSL FFQAIDRQQQ NLDAFLNLGG SYDQVDKLLG LFTSPRYQRN LASRGRLMSG DMSRSDYEAY LRELDFRVQR LQVLIDGFTK QTEQSLLTQV HEQKTNIAMI TSGVILVIVM LCWLGFGTWF RVNSKLDAII HTLTALINDE EKQTKVKVDG SDELTIFAQQ VNRVVEEKQR QTDEILHAKE SAVSANRAKS VFLANMSHEI RTPLNGIMGM TEILSQSELS SHQQEVVDDI DSSSQTLLTL LNDILDLSKI ESGRLELSLV EADIREVVYQ SMVLFQSKAT SKQLELGINL AENIPTRVMV DDHRIKQVIT NLVSNAVKFT ESGHIRVDVS YDELSEKECG VLMFKVEDTG IGIEQDKLTT IFEPFTQEDE GVSRQFGGTG LGLAICRQLV SMMGGQLIAT STKGVGTCFE FSIEVDVIPV FGWRSDVINK GLLICTNYDY ADQLLKECRL AKINLFGANN VNEVKAINDD FDVIFLCHRD DSNTDEALDE LSLKYDLRRV IICQHHLSTP YDNAERVHAV LTLPFLGNRF KHVIDDLAKV EKTISSDAVT NGIPKSEYRT SRSHRRILIA EDNLMNQKIA SFFLDKAGYD YLITSNGQEA LEAITKGEEF DAILMDCMMP VMDGLTATKE IRRWEKKAGR EKTTIIALTA SVLEEDIHNC FAAGMDAYLP KPYKSNQLFE LFNELKLA
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